RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 MSLNLQ96KJ4 702 aa15.65■□□□□ 0.1
CCDC43-202ENST00000457422 DNAAF2Q9NVR5 837 aaKnown RBP15.65■□□□□ 0.1
CCDC43-202ENST00000457422 PILRAQ9UKJ1 303 aa15.65■□□□□ 0.1
CCDC43-202ENST00000457422 HS3ST3A1Q9Y663 406 aa15.65■□□□□ 0.1
CCDC43-202ENST00000457422 A3GALT2U3KPV4 340 aa15.65■□□□□ 0.1
CCDC43-202ENST00000457422 CTSVO60911 334 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 BMP4P12644 408 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 POLR2CP19387 275 aaPredicted RBP15.64■□□□□ 0.09
CCDC43-202ENST00000457422 CPN2P22792 545 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 GRK5P34947 590 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 LTBRP36941 435 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 CHRNEQ04844 493 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 ITGADQ13349 1161 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 MFSD4BQ5TF39 518 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 RNLSQ5VYX0 342 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 FCRL6Q6DN72 434 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 WDR53Q7Z5U6 358 aaPredicted RBP15.64■□□□□ 0.09
CCDC43-202ENST00000457422 BTLAQ7Z6A9 289 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 IQCHQ86VS3 1027 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 NECTIN4Q96NY8 510 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 MS4A4EQ96PG1 132 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 POLDIP3Q9BY77 421 aaKnown RBP15.64■□□□□ 0.09
CCDC43-202ENST00000457422 KLHL25Q9H0H3 589 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 C6orf106Q9H6K1 298 aaPredicted RBP15.64■□□□□ 0.09
CCDC43-202ENST00000457422 CTPS2Q9NRF8 586 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 ACTR10Q9NZ32 417 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 RPL36Q9Y3U8 105 aaKnown RBP15.64■□□□□ 0.09
CCDC43-202ENST00000457422 GSAPA4D1B5 854 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 DUXAA6NLW8 204 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 AGR2O95994 175 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 GSTM3P21266 225 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 PRKAR1BP31321 381 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 RHAGQ02094 409 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 COL9A2Q14055 689 aaPredicted RBP15.64■□□□□ 0.09
CCDC43-202ENST00000457422 GPR18Q14330 331 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 NCF4Q15080 339 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 INAVAQ3KP66 663 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 FIGLAQ6QHK4 219 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 KBTBD8Q8NFY9 601 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 OR5M11Q96RB7 305 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 MGLLQ99685 303 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 MMP27Q9H306 513 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 CD207Q9UJ71 328 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 DAPP1Q9UN19 280 aa15.64■□□□□ 0.09
CCDC43-202ENST00000457422 OR6C74A6NCV1 312 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 METTL15A6NJ78 407 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 OCM2P0CE71 109 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 OCMP0CE72 109 aaPredicted RBP15.63■□□□□ 0.09
CCDC43-202ENST00000457422 GABRG2P18507 467 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 ZNF404Q494X3 552 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 MFSD12Q6NUT3 480 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 CDC73Q6P1J9 531 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 FAM111BQ6SJ93 734 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 C16orf62Q7Z3J2 963 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 TRIM48Q8IWZ4 208 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 OR2L13Q8N349 312 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 FAM26EQ8N5C1 309 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 CAMKVQ8NCB2 501 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 OR7G2Q8NG99 324 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 OR4K14Q8NGD5 310 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 MCFD2Q8NI22 146 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 WDR36Q8NI36 951 aaKnown RBP15.63■□□□□ 0.09
CCDC43-202ENST00000457422 RSC1A1Q92681 617 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 SLC6A18Q96N87 628 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 NXF2Q9GZY0 626 aaKnown RBP15.63■□□□□ 0.09
CCDC43-202ENST00000457422 RACGAP1Q9H0H5 632 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 ANKRD19PQ9H560 264 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 ARMC7Q9H6L4 198 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 DNAJC27Q9NZQ0 273 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 CCDC59Q9P031 241 aaKnown RBP15.63■□□□□ 0.09
CCDC43-202ENST00000457422 CHST2Q9Y4C5 530 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 FAM221BA6H8Z2 402 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 B3GALT2O43825 422 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 TNNI3P19429 210 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 ZNF10P21506 573 aaPredicted RBP15.63■□□□□ 0.09
CCDC43-202ENST00000457422 CSTF2P33240 577 aaKnown RBP eCLIP15.63■□□□□ 0.09
CCDC43-202ENST00000457422 LSM11P83369 360 aaKnown RBP eCLIP15.63■□□□□ 0.097e-6■■■■□ 19.8
CCDC43-202ENST00000457422 CDK5Q00535 292 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 ZNF91Q05481 1191 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 ILF3Q12906 894 aaKnown RBP eCLIP15.63■□□□□ 0.09
CCDC43-202ENST00000457422 RUNX2Q13950 521 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 INAQ16352 499 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 FAM214AQ32MH5 1076 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 TIMM50Q3ZCQ8 353 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 DEFB134Q4QY38 66 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 C6orf132Q5T0Z8 1188 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 Q6ZSR6 202 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 USP53Q70EK8 1073 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 ABHD13Q7L211 337 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 VRK2Q86Y07 508 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 IQCF1Q8N6M8 205 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 TCEANCQ8N8B7 351 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 ADAMTS15Q8TE58 950 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 PATE1Q8WXA2 126 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 DIO2Q92813 273 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 SLC35A4Q96G79 324 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 TMEM80Q96HE8 168 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 GPA33Q99795 319 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 TAPBPLQ9BX59 468 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 OR51E2Q9H255 320 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms