RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 SLC26A11Q86WA9 606 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 DHFR2Q86XF0 187 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 KLBQ86Z14 1044 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 SIAH3Q8IW03 269 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 C4orf19Q8IY42 314 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 YAF2Q8IY57 180 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 LRRC75A-AS1Q8N1F1 130 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 DCBLD1Q8N8Z6 715 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 SYT14Q8NB59 555 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 ABHD11Q8NFV4 315 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 OR10A7Q8NGE5 316 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 OR51L1Q8NGJ5 315 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 OR5M3Q8NGP4 307 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 RHEBL1Q8TAI7 183 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 MRGPRDQ8TDS7 321 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 HMGB4Q8WW32 186 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 P2RX5Q93086 422 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 TCEAL3Q969E4 200 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 ESAMQ96AP7 390 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 PDXPQ96GD0 296 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 ZNF597Q96LX8 424 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 C3orf30Q96M34 536 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 WFIKKN1Q96NZ8 548 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 CASD1Q96PB1 797 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 OR5B2Q96R09 309 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 CD180Q99467 661 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 PRMT1Q99873 361 aaKnown RBP5.08□□□□□ -1.6
VPS41-209ENST00000457055 ZNF251Q9BRH9 671 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 ZNF2Q9BSG1 426 aaPredicted RBP5.08□□□□□ -1.6
VPS41-209ENST00000457055 MSTO1Q9BUK6 570 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 SPATA5L1Q9BVQ7 753 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 DPH1Q9BZG8 443 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 SLC19A3Q9BZV2 496 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 FOXP1Q9H334 677 aaPredicted RBP5.08□□□□□ -1.6
VPS41-209ENST00000457055 TMEM231Q9H6L2 316 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 SRD5A3Q9H8P0 318 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 WDR76Q9H967 626 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 LPAR2Q9HBW0 351 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 S100A14Q9HCY8 104 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 ZDHHC4Q9NPG8 344 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 TIGARQ9NQ88 270 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 OLAHQ9NV23 265 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 SLC2A8Q9NY64 477 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 NLGN3Q9NZ94 848 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 ADA2Q9NZK5 511 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 CNOT2Q9NZN8 540 aaKnown RBP5.08□□□□□ -1.6
VPS41-209ENST00000457055 CCDC59Q9P031 241 aaKnown RBP5.08□□□□□ -1.6
VPS41-209ENST00000457055 STOX2Q9P2F5 926 aaPredicted RBP5.08□□□□□ -1.6
VPS41-209ENST00000457055 CNTN6Q9UQ52 1028 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 PPP1R3CQ9UQK1 317 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 CA5BQ9Y2D0 317 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 SLX4Q8IY92 1834 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 DLEC1Q9Y238 1755 aa5.08□□□□□ -1.6
VPS41-209ENST00000457055 NID2Q14112 1375 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 CLUHO75153 1309 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 SLC5A10A0PJK1 596 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 PQLC2LA1A4F0 135 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 PRSS38A1L453 326 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 MBLAC1A4D2B0 266 aaPredicted RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 ANKDD1BA6NHY2 528 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 RFPL4AA6NLU0 287 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 E9PAM4 449 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 RFPL4AL1F8VTS6 287 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 SMLR1H3BR10 107 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 hCG_2039718K7EN88 272 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 ACOX3O15254 700 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 OGG1O15527 345 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 LCMT2O60294 686 aaKnown RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 EIF1BO60739 113 aaKnown RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 MOSPD3O75425 235 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 BCAR3O75815 825 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 VAMP5O95183 116 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 LYPLA2O95372 231 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 MOCS3O95396 460 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 LY86O95711 162 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 WDPCPO95876 746 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 SERPIND1P05546 499 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 CRHP06850 196 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 THRAP10827 490 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 ZNF44P15621 663 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 LBPP18428 481 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 PAICSP22234 425 aaKnown RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 UBA1P22314 1058 aaKnown RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 ZFP36P26651 326 aaKnown RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 KLRC1P26715 233 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 OTX1P32242 354 aaPredicted RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 PTGER4P35408 488 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 EIF1P41567 113 aaKnown RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 NSFP46459 744 aaKnown RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 YAP1P46937 504 aaKnown RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 CAMPP49913 170 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 RAB13P51153 203 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 MMP15P51511 669 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 NDST1P52848 882 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 ARSFP54793 590 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 GPC5P78333 572 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 ELF3P78545 371 aaPredicted RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 CCZ1BP86790 482 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 CCZ1P86791 482 aaPredicted RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 SLC39A6Q13433 755 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms