RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 MDC1Q14676 2089 aaKnown RBP17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 TBC1D3DA0A087WVF3 549 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 TBC1D3IA0A087WXS9 549 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 TBC1D3EA0A087X179 549 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 TBC1D3KA0A087X1G2 549 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 TBC1D3FA6NER0 549 aaPredicted RBP17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 TBC1D3LB9A6J9 549 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 SLC31A1O15431 190 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 KIAA0513O60268 411 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 TPST2O60704 377 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 GPX5O75715 221 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 EML2O95834 649 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 CHRM5P08912 532 aaPredicted RBP17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 TBC1D3HP0C7X1 549 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 LAMP2P13473 410 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 NTSR1P30989 418 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 BUD31P41223 144 aaPredicted RBP17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 NKX2-5P52952 324 aaPredicted RBP17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 LSM11P83369 360 aaKnown RBP eCLIP17.27■□□□□ 0.366e-9■□□□□ 9.3
SEMA3B-209ENST00000456560 ZNF91Q05481 1191 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 LRIT3Q3SXY7 679 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 TIMM50Q3ZCQ8 353 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 TBC1D3GQ6DHY5 549 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 TBC1D3CQ6IPX1 549 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 TMEM184AQ6ZMB5 413 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 BCDIN3DQ7Z5W3 292 aaKnown RBP17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 IQCHQ86VS3 1027 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 TBC1D3Q8IZP1 549 aaPredicted RBP17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 CYP4Z2PQ8N1L4 340 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 IQCF1Q8N6M8 205 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 ELP4Q96EB1 424 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 OR7D2Q96RA2 312 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 TSSK6Q9BXA6 273 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 HOXD1Q9GZZ0 328 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 MIR1-1HGQ9H1L0 117 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 TBC1D29Q9UFV1 150 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 CLEC2DQ9UHP7 191 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 KLF15Q9UIH9 416 aa17.27■□□□□ 0.36
SEMA3B-209ENST00000456560 PRSS38A1L453 326 aa17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 ISM1B1AKI9 464 aa17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 PRKYO43930 277 aa17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 PTTG1O95997 202 aa17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 ASGR2P07307 311 aa17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 HOXC4P09017 264 aaPredicted RBP17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 S100A5P33763 92 aa17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 STXBP1P61764 594 aaKnown RBP17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 PPP2CBP62714 309 aa17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 PPP2CAP67775 309 aa17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 EFNB1P98172 346 aa17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 PRKCDQ05655 676 aa17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 GPAT3Q53EU6 434 aa17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 ANKRD54Q6NXT1 300 aa17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 VN1R4Q7Z5H5 301 aa17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 AMIGO1Q86WK6 493 aa17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 NUP43Q8NFH3 380 aa17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 LYARQ9NX58 379 aaKnown RBP17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 TVP23BQ9NYZ1 205 aa17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 OR6C2Q9NZP2 312 aa17.27■□□□□ 0.35
SEMA3B-209ENST00000456560 ATG2BQ96BY7 2078 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 SYT5O00445 386 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 CSO75390 466 aaKnown RBP17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 CKMT1AP12532 417 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 ALOX12P18054 663 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 COL9A1P20849 921 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 ENDOUP21128 410 aaKnown RBP17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 MPIP34949 423 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 MC3RP41968 323 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 GIPRP48546 466 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 PRR5P85299 388 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 CDK5Q00535 292 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 GINS1Q14691 196 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 DESI1Q6ICB0 168 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 NANOGP1Q8N7R0 232 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 OR4E2Q8NGC2 313 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 CAPSLQ8WWF8 208 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 ASB12Q8WXK4 309 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 TRNT1Q96Q11 434 aaKnown RBP17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 ARHGDIGQ99819 225 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 RACGAP1Q9H0H5 632 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 SLC38A1Q9H2H9 487 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 QPCTLQ9NXS2 382 aa17.26■□□□□ 0.35
SEMA3B-209ENST00000456560 NR4A2P43354 598 aa17.25■□□□□ 0.35
SEMA3B-209ENST00000456560 KIAA1024LP59773 190 aa17.25■□□□□ 0.35
SEMA3B-209ENST00000456560 ZNF45Q02386 682 aa17.25■□□□□ 0.35
SEMA3B-209ENST00000456560 TJAP1Q5JTD0 557 aa17.25■□□□□ 0.35
SEMA3B-209ENST00000456560 ACSM5Q6NUN0 579 aa17.25■□□□□ 0.35
SEMA3B-209ENST00000456560 NRROSQ86YC3 692 aa17.25■□□□□ 0.35
SEMA3B-209ENST00000456560 SLC34A3Q8N130 599 aa17.25■□□□□ 0.35
SEMA3B-209ENST00000456560 PARP16Q8N5Y8 322 aa17.25■□□□□ 0.35
SEMA3B-209ENST00000456560 OR9A2Q8NGT5 310 aa17.25■□□□□ 0.35
SEMA3B-209ENST00000456560 LCN9Q8WX39 176 aa17.25■□□□□ 0.35
SEMA3B-209ENST00000456560 OR1E3Q8WZA6 343 aa17.25■□□□□ 0.35
SEMA3B-209ENST00000456560 QRSL1Q9H0R6 528 aaKnown RBP17.25■□□□□ 0.35
SEMA3B-209ENST00000456560 C3orf14Q9HBI5 128 aa17.25■□□□□ 0.35
SEMA3B-209ENST00000456560 POLMQ9NP87 494 aaPredicted RBP17.25■□□□□ 0.35
SEMA3B-209ENST00000456560 GIMAP4Q9NUV9 329 aa17.25■□□□□ 0.35
SEMA3B-209ENST00000456560 PEX16Q9Y5Y5 336 aa17.25■□□□□ 0.35
SEMA3B-209ENST00000456560 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.25■□□□□ 0.35
SEMA3B-209ENST00000456560 A0A1W2PQF6 199 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms