RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 PPCDCQ96CD2 204 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 PAIP2Q9BPZ3 127 aaKnown RBP15.94■□□□□ 0.14
USP39-208ENST00000455732 ZDHHC11Q9H8X9 412 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 PROK2Q9HC23 129 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 ASIC5Q9NY37 505 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 NKIRAS1Q9NYS0 192 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 TAS2R9Q9NYW1 312 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 GIMAP2Q9UG22 337 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 BAIAP2L1Q9UHR4 511 aa15.94■□□□□ 0.14
USP39-208ENST00000455732 GPR55Q9Y2T6 319 aaPredicted RBP15.94■□□□□ 0.14
USP39-208ENST00000455732 G3V3Y1 287 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 CCL21O00585 134 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 PDPK1O15530 556 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 AKAP10O43572 662 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 HS6ST1O60243 411 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 PPM1BO75688 479 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 LRATO95237 230 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 PRPS2P11908 318 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 H2AFXP16104 143 aaPredicted RBP15.93■□□□□ 0.14
USP39-208ENST00000455732 COL8A1P27658 744 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 HPCAL1P37235 193 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 PIGAP37287 484 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 RPL3P39023 403 aaKnown RBP15.93■□□□□ 0.14
USP39-208ENST00000455732 MC3RP41968 323 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 DNASE1L1P49184 302 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 FBXW4P57775 412 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 PPIAP62937 165 aaKnown RBP15.93■□□□□ 0.14
USP39-208ENST00000455732 RPP38P78345 283 aaKnown RBP15.93■□□□□ 0.14
USP39-208ENST00000455732 HSF1Q00613 529 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 MAD2L1Q13257 205 aaPredicted RBP15.93■□□□□ 0.14
USP39-208ENST00000455732 ZNF385BQ569K4 471 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 TMEM81Q6P7N7 255 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 TMEM107Q6UX40 140 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 R3HCC1LQ7Z5L2 792 aaKnown RBP15.93■□□□□ 0.14
USP39-208ENST00000455732 FGD2Q7Z6J4 655 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 LRRC34Q8IZ02 419 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 FNDC5Q8NAU1 212 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 CLHC1Q8NHS4 586 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 SPPL2AQ8TCT8 520 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 TUBGCP3Q96CW5 907 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 CCDC120Q96HB5 630 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 MAGED4Q96JG8 741 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 ANKRA2Q9H9E1 313 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 FOLH1BQ9HBA9 442 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 ACSS1Q9NUB1 689 aaPredicted RBP15.93■□□□□ 0.14
USP39-208ENST00000455732 ARGLU1Q9NWB6 273 aaPredicted RBP15.93■□□□□ 0.14
USP39-208ENST00000455732 TUBA8Q9NY65 449 aaPredicted RBP15.93■□□□□ 0.14
USP39-208ENST00000455732 ATP6V1HQ9UI12 483 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 TINAGQ9UJW2 476 aa15.93■□□□□ 0.14
USP39-208ENST00000455732 C19orf53Q9UNZ5 99 aaPredicted RBP15.93■□□□□ 0.14
USP39-208ENST00000455732 SCAMP2O15127 329 aaKnown RBP15.92■□□□□ 0.14
USP39-208ENST00000455732 ZNHIT1O43257 154 aa15.92■□□□□ 0.14
USP39-208ENST00000455732 SNNO75324 88 aaPredicted RBP15.92■□□□□ 0.14
USP39-208ENST00000455732 ABCB1P08183 1280 aaPredicted RBP15.92■□□□□ 0.14
USP39-208ENST00000455732 CT45A8P0DMV1 189 aa15.92■□□□□ 0.14
USP39-208ENST00000455732 CT45A9P0DMV2 189 aa15.92■□□□□ 0.14
USP39-208ENST00000455732 PLGLB1Q02325 96 aa15.92■□□□□ 0.14
USP39-208ENST00000455732 EMX2Q04743 252 aa15.92■□□□□ 0.14
USP39-208ENST00000455732 PLCXD2Q0VAA5 305 aa15.92■□□□□ 0.14
USP39-208ENST00000455732 PDCD2Q16342 344 aaPredicted RBP15.92■□□□□ 0.14
USP39-208ENST00000455732 NNATQ16517 81 aa15.92■□□□□ 0.14
USP39-208ENST00000455732 CT45A2Q5DJT8 189 aa15.92■□□□□ 0.14
USP39-208ENST00000455732 ANKRD26P1Q6NSI1 321 aa15.92■□□□□ 0.14
USP39-208ENST00000455732 SLC34A3Q8N130 599 aa15.92■□□□□ 0.14
USP39-208ENST00000455732 LIX1Q8N485 282 aa15.92■□□□□ 0.14
USP39-208ENST00000455732 FAM109AQ8N4B1 249 aa15.92■□□□□ 0.14
USP39-208ENST00000455732 ZFP28Q8NHY6 868 aa15.92■□□□□ 0.14
USP39-208ENST00000455732 NTNG2Q96CW9 530 aa15.92■□□□□ 0.14
USP39-208ENST00000455732 OMA1Q96E52 524 aa15.92■□□□□ 0.14
USP39-208ENST00000455732 ELP4Q96EB1 424 aa15.92■□□□□ 0.14
USP39-208ENST00000455732 ZBED6CLQ96FA7 236 aaPredicted RBP15.92■□□□□ 0.14
USP39-208ENST00000455732 DDX18Q9NVP1 670 aaKnown RBP15.92■□□□□ 0.14
USP39-208ENST00000455732 THAP1Q9NVV9 213 aa15.92■□□□□ 0.14
USP39-208ENST00000455732 SH3BGRL2Q9UJC5 107 aa15.92■□□□□ 0.14
USP39-208ENST00000455732 BOKQ9UMX3 212 aaPredicted RBP15.92■□□□□ 0.14
USP39-208ENST00000455732 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.92■□□□□ 0.14
USP39-208ENST00000455732 PHF3Q92576 2039 aaKnown RBP15.92■□□□□ 0.14
USP39-208ENST00000455732 LRRC3CA6NJW4 275 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 UPK1AO00322 258 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 TRIM3O75382 744 aaPredicted RBP15.91■□□□□ 0.14
USP39-208ENST00000455732 ERN1O75460 977 aaKnown RBP15.91■□□□□ 0.14
USP39-208ENST00000455732 CASP6P55212 293 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 C21orf58P58505 322 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 KCNJ2P63252 427 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 PTGR1Q14914 329 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 MLC1Q15049 377 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 PRAMEF20Q5VT98 475 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 IL23RQ5VWK5 629 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 NPSR1Q6W5P4 371 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 NUP54Q7Z3B4 507 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 TRIM42Q8IWZ5 723 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 PRR22Q8IZ63 422 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 TMEM251Q8N6I4 163 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 OR52N2Q8NGI0 321 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 OR5M3Q8NGP4 307 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 MGARPQ8TDB4 240 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 ITLN2Q8WWU7 325 aaPredicted RBP15.91■□□□□ 0.14
USP39-208ENST00000455732 DIO2Q92813 273 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 HGDQ93099 445 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 CIDECQ96AQ7 238 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms