RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 ANKRD54Q6NXT1 300 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 TUBA3EQ6PEY2 450 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 TTC33Q6PID6 262 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 UQCC3Q6UW78 93 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 FAM151BQ6UXP7 276 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 Q6ZWC4 215 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 H2BFWTQ7Z2G1 175 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 GOLGA7Q7Z5G4 137 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 ABHD12BQ7Z5M8 362 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 ACOT1Q86TX2 421 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 COMMD2Q86X83 199 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 SFR1Q86XK3 245 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 TBC1D10CQ8IV04 446 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 MMAAQ8IVH4 418 aaKnown RBP4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 MAP7D3Q8IWC1 876 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 SFTPA1Q8IWL2 248 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 TEX26Q8N6G2 289 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 SNX31Q8N9S9 440 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 CPEB3Q8NE35 698 aaKnown RBP4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 STXBP6Q8NFX7 210 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 OR2L3Q8NG85 312 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 OR6M1Q8NGM8 313 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 OR4L1Q8NH43 312 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 WDR36Q8NI36 951 aaKnown RBP4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 HCAR2Q8TDS4 363 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 PIH1D2Q8WWB5 315 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 SMPDL3AQ92484 453 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 ERGIC1Q969X5 290 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 FAM89AQ96GI7 184 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 GRAMD2BQ96HH9 432 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 B3GALT6Q96L58 329 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 ZNF578Q96N58 590 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 NAT9Q9BTE0 207 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 ERVK-6Q9BXR3 956 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 DGCR6LQ9BY27 220 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 LHPPQ9H008 270 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 MIS12Q9H081 205 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 OR51V1Q9H2C8 321 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 HIPK2Q9H2X6 1198 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 RIMS4Q9H426 269 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 FAM124BQ9H5Z6 455 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 C10orf88Q9H8K7 445 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 AGO3Q9H9G7 860 aaKnown RBP4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 IL1RL2Q9HB29 575 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 LPAR2Q9HBW0 351 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 SLC40A1Q9NP59 571 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 C8orf4Q9NR00 106 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 PAQR5Q9NXK6 330 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 NPAP1Q9NZP6 1156 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 RCC2Q9P258 522 aaKnown RBP4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 GAGE2DQ9UEU5 116 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 SIX4Q9UIU6 781 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 GSTK1Q9Y2Q3 226 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 NSG2Q9Y328 171 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 INSL6Q9Y581 213 aa4.06□□□□□ -1.76
HMGB3P21-201ENST00000452483 POLR3AO14802 1390 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 GRIN2DO15399 1336 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 MTMR11A4FU01 709 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 ZNF840PA6NDX5 716 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 GOLGA6L4A6NEF3 574 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 KCNU1A8MYU2 1149 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 HHLA1C9JL84 531 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 LEFTY2O00292 366 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 BTN3A3O00478 584 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 CLOCKO15516 846 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 N4BP1O75113 896 aaKnown RBP4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 MFAP3LO75121 409 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 LRCH4O75427 683 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 SEMA3DO95025 777 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 NDUFB4O95168 129 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 NSA2O95478 260 aaKnown RBP4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 RAF1P04049 648 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 UBCP0CG48 685 aaKnown RBP4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 ATP1B2P14415 290 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 UQCRBP14927 111 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 MAOAP21397 527 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 FPR3P25089 353 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 SRD5A2P31213 254 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 AHRP35869 848 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 NPY2RP49146 381 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 STK19P49842 368 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 PSMD7P51665 324 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 CEBPGP53567 150 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 EMP2P54851 167 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 PLP1P60201 277 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 CXADRP78310 365 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 MAT1AQ00266 395 aaKnown RBP4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 GLO1Q04760 184 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 SPHARQ15513 63 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 GGTA1PQ4G0N0 100 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 NCAPH2Q6IBW4 605 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 RTL6Q6ICC9 239 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 CWC27Q6UX04 472 aaKnown RBP4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 DEF8Q6ZN54 512 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 Q6ZSN1 163 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 CYB5R4Q7L1T6 521 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 MON1BQ7L1V2 547 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 ARCQ7LC44 396 aa4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 MRPL21Q7Z2W9 205 aaKnown RBP4.05□□□□□ -1.76
HMGB3P21-201ENST00000452483 PID1Q7Z2X4 250 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms