RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 NTRK2Q16620 822 aa18.37■□□□□ 0.53
COL9A3-202ENST00000452372 SPATA19Q7Z5L4 167 aa18.37■□□□□ 0.53
COL9A3-202ENST00000452372 POGLUT1Q8NBL1 392 aa18.37■□□□□ 0.53
COL9A3-202ENST00000452372 NUDT8Q8WV74 236 aa18.37■□□□□ 0.53
COL9A3-202ENST00000452372 NR4A3Q92570 626 aa18.37■□□□□ 0.53
COL9A3-202ENST00000452372 MAELQ96JY0 434 aaKnown RBP18.37■□□□□ 0.53
COL9A3-202ENST00000452372 MAGEB18Q96M61 343 aa18.37■□□□□ 0.53
COL9A3-202ENST00000452372 VSTM2LQ96N03 204 aa18.37■□□□□ 0.53
COL9A3-202ENST00000452372 FOLH1BQ9HBA9 442 aa18.37■□□□□ 0.53
COL9A3-202ENST00000452372 SH2D2AQ9NP31 389 aa18.37■□□□□ 0.53
COL9A3-202ENST00000452372 SLCO1B3Q9NPD5 702 aa18.37■□□□□ 0.53
COL9A3-202ENST00000452372 SLC5A6Q9Y289 635 aa18.37■□□□□ 0.53
COL9A3-202ENST00000452372 GOLGA8QA0A0J9YX86 632 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 GOLGA8OA6NCC3 632 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 GOLGA8NF8WBI6 632 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 TO15178 435 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 COQ9O75208 318 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 PSMG1O95456 288 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 EDN3P14138 238 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 NAGAP17050 411 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 CNR1P21554 472 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 ABCD3P28288 659 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 GPC1P35052 558 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 MEOX1P50221 254 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 SLC22A10Q63ZE4 541 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 TMEM64Q6YI46 380 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 MAVSQ7Z434 540 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 CAMKMTQ7Z624 323 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 LURAP1LQ8IV03 231 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 CPSF7Q8N684 471 aaKnown RBP18.36■□□□□ 0.53
COL9A3-202ENST00000452372 PAQR8Q8TEZ7 354 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 BTBD9Q96Q07 612 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 BHLHE41Q9C0J9 482 aaPredicted RBP18.36■□□□□ 0.53
COL9A3-202ENST00000452372 SACM1LQ9NTJ5 587 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 DEPPQ9NTK1 212 aa18.36■□□□□ 0.53
COL9A3-202ENST00000452372 DDX18Q9NVP1 670 aaKnown RBP18.36■□□□□ 0.53
COL9A3-202ENST00000452372 A0A1W2PRB8 838 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 FRG2CA6NGY1 282 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 ANKRD28O15084 1053 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 ATP8B1O43520 1251 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 NME6O75414 186 aaPredicted RBP18.35■□□□□ 0.53
COL9A3-202ENST00000452372 ERN1O75460 977 aaKnown RBP18.35■□□□□ 0.53
COL9A3-202ENST00000452372 P04436 131 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 ALDOCP09972 364 aaKnown RBP18.35■□□□□ 0.53
COL9A3-202ENST00000452372 CT45A8P0DMV1 189 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 CT45A9P0DMV2 189 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 CCL3P10147 92 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 TMED10P49755 219 aaKnown RBP18.35■□□□□ 0.53
COL9A3-202ENST00000452372 TDGF1P3P51864 188 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 GPR85P60893 370 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 SLC9B1Q4ZJI4 515 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 CT45A2Q5DJT8 189 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 RGS9BPQ6ZS82 235 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 MAMDC2Q7Z304 686 aaPredicted RBP18.35■□□□□ 0.53
COL9A3-202ENST00000452372 FAM13CQ8NE31 585 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 OR10G3Q8NGC4 313 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 ACTRT2Q8TDY3 377 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 MAGED4Q96JG8 741 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 DUSP26Q9BV47 211 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 DPY30Q9C005 99 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 CNIH4Q9P003 139 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 NTMQ9P121 344 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 CHCHD2Q9Y6H1 151 aaPredicted RBP18.35■□□□□ 0.53
COL9A3-202ENST00000452372 USH1CQ9Y6N9 552 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 NINQ8N4C6 2090 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 LRBAP50851 2863 aa18.35■□□□□ 0.53
COL9A3-202ENST00000452372 MYO9AB2RTY4 2548 aa18.34■□□□□ 0.53
COL9A3-202ENST00000452372 EXPH5Q8NEV8 1989 aa18.34■□□□□ 0.53
COL9A3-202ENST00000452372 TP53I11O14683 189 aa18.34■□□□□ 0.53
COL9A3-202ENST00000452372 PPM1BO75688 479 aa18.34■□□□□ 0.53
COL9A3-202ENST00000452372 TGDSO95455 350 aa18.34■□□□□ 0.53
COL9A3-202ENST00000452372 EFNA1P20827 205 aaPredicted RBP18.34■□□□□ 0.53
COL9A3-202ENST00000452372 MST1P26927 711 aa18.34■□□□□ 0.53
COL9A3-202ENST00000452372 CDK9P50750 372 aaKnown RBP18.34■□□□□ 0.53
COL9A3-202ENST00000452372 PSPHP78330 225 aa18.34■□□□□ 0.53
COL9A3-202ENST00000452372 ALDH6A1Q02252 535 aaKnown RBP18.34■□□□□ 0.53
COL9A3-202ENST00000452372 RPS6KA2Q15349 733 aa18.34■□□□□ 0.53
COL9A3-202ENST00000452372 NNATQ16517 81 aa18.34■□□□□ 0.53
COL9A3-202ENST00000452372 HSP90B2PQ58FF3 399 aa18.34■□□□□ 0.53
COL9A3-202ENST00000452372 NXNQ6DKJ4 435 aa18.34■□□□□ 0.53
COL9A3-202ENST00000452372 EPGNQ6UW88 154 aa18.34■□□□□ 0.53
COL9A3-202ENST00000452372 PRR22Q8IZ63 422 aa18.34■□□□□ 0.53
COL9A3-202ENST00000452372 ZFP62Q8NB50 900 aaPredicted RBP18.34■□□□□ 0.53
COL9A3-202ENST00000452372 OR2M7Q8NG81 312 aa18.34■□□□□ 0.53
COL9A3-202ENST00000452372 CEP70Q8NHQ1 597 aa18.34■□□□□ 0.53
COL9A3-202ENST00000452372 OR5P2Q8WZ92 322 aa18.34■□□□□ 0.53
COL9A3-202ENST00000452372 SECISBP2Q96T21 854 aaKnown RBP18.34■□□□□ 0.53
COL9A3-202ENST00000452372 C3orf14Q9HBI5 128 aa18.34■□□□□ 0.53
COL9A3-202ENST00000452372 AIG1Q9NVV5 245 aa18.34■□□□□ 0.53
COL9A3-202ENST00000452372 ABCB1P08183 1280 aaPredicted RBP18.33■□□□□ 0.52
COL9A3-202ENST00000452372 CORO7P57737 925 aa18.33■□□□□ 0.52
COL9A3-202ENST00000452372 FBXW4P57775 412 aa18.33■□□□□ 0.52
COL9A3-202ENST00000452372 PSG6Q00889 435 aa18.33■□□□□ 0.52
COL9A3-202ENST00000452372 SRSF11Q05519 484 aaKnown RBP18.33■□□□□ 0.52
COL9A3-202ENST00000452372 PGS1Q32NB8 556 aa18.33■□□□□ 0.52
COL9A3-202ENST00000452372 LSM12Q3MHD2 195 aaKnown RBP18.33■□□□□ 0.52
COL9A3-202ENST00000452372 RNFT1Q5M7Z0 435 aa18.33■□□□□ 0.52
COL9A3-202ENST00000452372 ZNF787Q6DD87 383 aa18.33■□□□□ 0.52
COL9A3-202ENST00000452372 NPSR1Q6W5P4 371 aa18.33■□□□□ 0.52
COL9A3-202ENST00000452372 FAM47EQ6ZV65 393 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms