RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 C2orf72A6NCS6 295 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 OR14I1A6ND48 311 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 FRG2CA6NGY1 282 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 RGS14O43566 566 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 HCN1O60741 890 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 BCAS2O75934 225 aaPredicted RBP11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 SNX4O95219 450 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 CLDN14O95500 239 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 BPGMP07738 259 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 TRPC1P48995 793 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 MAN2A2P49641 1150 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 TMED10P49755 219 aaKnown RBP11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 NCBP2P52298 156 aaKnown RBP eCLIP11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 DCAF7P61962 342 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 PLCXD2Q0VAA5 305 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 KRT71Q3SY84 523 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 TMEM198Q66K66 360 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 RTL6Q6ICC9 239 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 ANKRD26P1Q6NSI1 321 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 ZNF585AQ6P3V2 769 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 NUP54Q7Z3B4 507 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 FAM9CQ8IZT9 166 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 CLYBLQ8N0X4 340 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 SLC34A3Q8N130 599 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 OR4N2Q8NGD1 307 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 GFM2Q969S9 779 aaKnown RBP11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 TMBIM1Q969X1 311 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 SDCCAG3Q96C92 435 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 METTL2AQ96IZ6 378 aaKnown RBP11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 BTBD9Q96Q07 612 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 UBQLN3Q9H347 655 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 GLIPR2Q9H4G4 154 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 LDAHQ9H6V9 325 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 MIEF1Q9NQG6 463 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 GIMAP2Q9UG22 337 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 BAIAP2L1Q9UHR4 511 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 FAM215AQ9Y5M1 114 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 ABCA12Q86UK0 2595 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 CSMD1Q96PZ7 3565 aa11.3□□□□□ -0.6
CSNK1E-211ENST00000451964 LRBAP50851 2863 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 ADGRG4Q8IZF6 3080 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 BCKDKO14874 412 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 PIP5K1BO14986 540 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 LSM1O15116 133 aaKnown RBP11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 HNRNPRO43390 633 aaKnown RBP11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 ICOSLGO75144 302 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 SDC1P18827 310 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 ACVR2AP27037 513 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 MC3RP41968 323 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 KIR3DL1P43629 444 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 NUP107P57740 925 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 PMPCAQ10713 525 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 TIGD3Q6B0B8 471 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 TMEM107Q6UX40 140 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 IKBIPQ70UQ0 350 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 EXOC3L1Q86VI1 746 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 PACS2Q86VP3 889 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 CCDC71Q8IV32 467 aaPredicted RBP11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 EID3Q8N140 333 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 CLHC1Q8NHS4 586 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 NEIL3Q8TAT5 605 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 AGR3Q8TD06 166 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 TWIST2Q8WVJ9 160 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 MARVELD3Q96A59 401 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 TMEM41AQ96HV5 264 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 ZNF597Q96LX8 424 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 AMDHD1Q96NU7 426 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 FOLH1BQ9HBA9 442 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 GALNT9Q9HCQ5 603 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 QPCTLQ9NXS2 382 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 ZDHHC2Q9UIJ5 367 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 ACAD8Q9UKU7 415 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 RNF6Q9Y252 685 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 C15orf41Q9Y2V0 281 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 FBN2P35556 2912 aa11.29□□□□□ -0.6
CSNK1E-211ENST00000451964 NCOA6Q14686 2063 aaPredicted RBP11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 A0A087WV62 115 aa11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 OR6C70A6NIJ9 312 aa11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 UPK1AO00322 258 aa11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 PLOD2O00469 737 aa11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 GNB5O14775 395 aa11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 AKAP10O43572 662 aa11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 TSPAN2O60636 221 aa11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 ERN1O75460 977 aaKnown RBP11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 REM1O75628 298 aa11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 TRAPPC6AO75865 159 aa11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 PSMG1O95456 288 aa11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 HPNP05981 417 aa11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 GLI4P10075 376 aa11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 BCKDHAP12694 445 aa11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 GDF1P27539 372 aa11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 PTPN6P29350 595 aa11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 MASP1P48740 699 aa11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 CDK9P50750 372 aaKnown RBP11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 RPL38P63173 70 aaKnown RBP11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 RPP38P78345 283 aaKnown RBP11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 PSG6Q00889 435 aa11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 MPP2Q14168 576 aa11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 GALNTL6Q49A17 601 aa11.28□□□□□ -0.6
CSNK1E-211ENST00000451964 ZNF385BQ569K4 471 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms