RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SZRD1Q7Z422 152 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 RPS19BP1Q86WX3 136 aaKnown RBP12.07□□□□□ -0.48
VPS33A-202ENST00000451053 DEFB107AQ8IZN7 70 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 BEST3Q8N1M1 668 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 CLEC4FQ8N1N0 589 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 ARMC10Q8N2F6 343 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 ZNF441Q8N8Z8 693 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 NUP43Q8NFH3 380 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 OR5AK3PQ8NH89 298 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 GOT1L1Q8NHS2 421 aaPredicted RBP12.07□□□□□ -0.48
VPS33A-202ENST00000451053 NUBPLQ8TB37 319 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 FAM120BQ96EK7 910 aaKnown RBP12.07□□□□□ -0.48
VPS33A-202ENST00000451053 RAB3IPQ96QF0 476 aaPredicted RBP12.07□□□□□ -0.48
VPS33A-202ENST00000451053 SMAD5Q99717 465 aaKnown RBP12.07□□□□□ -0.48
VPS33A-202ENST00000451053 FOLH1BQ9HBA9 442 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 SPAG4Q9NPE6 437 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 SERHLQ9NQF3 203 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 NTMQ9P121 344 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 LHX6Q9UPM6 363 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 CORO2BQ9UQ03 480 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 TP53TG5Q9Y2B4 290 aa12.07□□□□□ -0.48
VPS33A-202ENST00000451053 HEMK1Q9Y5R4 338 aaPredicted RBP12.07□□□□□ -0.48
VPS33A-202ENST00000451053 NUP214P35658 2090 aaPredicted RBP12.06□□□□□ -0.48
VPS33A-202ENST00000451053 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 C2orf92A0A1B0GVN3 265 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 ZNF354AO60765 605 aaPredicted RBP12.06□□□□□ -0.48
VPS33A-202ENST00000451053 COQ9O75208 318 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 OR2J2O76002 312 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 F10P00742 488 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 CCT3P49368 545 aaKnown RBP12.06□□□□□ -0.48
VPS33A-202ENST00000451053 PRKAG1P54619 331 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 ZNF155Q12901 538 aaPredicted RBP12.06□□□□□ -0.48
VPS33A-202ENST00000451053 MFAP5Q13361 173 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 GAB1Q13480 694 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 NNATQ16517 81 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 MEP1AQ16819 746 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 SPDYE7PQ495Y7 208 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 ABHD17BQ5VST6 288 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 C8orf82Q6P1X6 216 aaPredicted RBP12.06□□□□□ -0.48
VPS33A-202ENST00000451053 DLEU7Q6UYE1 221 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 DNAJC14Q6Y2X3 702 aaPredicted RBP12.06□□□□□ -0.48
VPS33A-202ENST00000451053 TMEM64Q6YI46 380 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 WDR53Q7Z5U6 358 aaPredicted RBP12.06□□□□□ -0.48
VPS33A-202ENST00000451053 LGI4Q8N135 537 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 OR8J3Q8NGG0 315 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 OR5L2Q8NGL0 311 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 FBXO27Q8NI29 283 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 C9orf43Q8TAL5 461 aaPredicted RBP12.06□□□□□ -0.48
VPS33A-202ENST00000451053 ADIPOR1Q96A54 375 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 GIMAP5Q96F15 307 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 ZNF354BQ96LW1 612 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 VSTM2LQ96N03 204 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 PHF12Q96QT6 1004 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 CGREF1Q99674 301 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 GPATCH1Q9BRR8 931 aaKnown RBP12.06□□□□□ -0.48
VPS33A-202ENST00000451053 PAIP1Q9H074 479 aaKnown RBP12.06□□□□□ -0.48
VPS33A-202ENST00000451053 RAD21L1Q9H4I0 556 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 IL1RL2Q9HB29 575 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 C3orf14Q9HBI5 128 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 EQTNQ9NQ60 294 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 SLC6A13Q9NSD5 602 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 ZCCHC3Q9NUD5 404 aaKnown RBP12.06□□□□□ -0.48
VPS33A-202ENST00000451053 STMN3Q9NZ72 180 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 MYOTQ9UBF9 498 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 PRODH2Q9UF12 536 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.06□□□□□ -0.48
VPS33A-202ENST00000451053 TEKT2Q9UIF3 430 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 CPAMD8Q8IZJ3 1885 aa12.06□□□□□ -0.48
VPS33A-202ENST00000451053 PKD1L2Q7Z442 2459 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 EVPLLA8MZ36 301 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 ERVH48-1M5A8F1 160 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 FXYD1O00168 92 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 DNAJA2O60884 412 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 ITGA10O75578 1167 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 NADKO95544 446 aaPredicted RBP12.05□□□□□ -0.48
VPS33A-202ENST00000451053 WDPCPO95876 746 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 C1QCP02747 245 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 ALPPP05187 535 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 GSNP06396 782 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 PGM1P36871 562 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 CORO7P57737 925 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 PRR5P85299 388 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 TP53BP2Q13625 1128 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 GTDC1Q4AE62 458 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 SAMD4BQ5PRF9 694 aaKnown RBP12.05□□□□□ -0.48
VPS33A-202ENST00000451053 ZNF468Q5VIY5 522 aaPredicted RBP12.05□□□□□ -0.48
VPS33A-202ENST00000451053 HLA-DQA1Q5Y7H0 255 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 BHLHB9Q6PI77 547 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 NPSR1Q6W5P4 371 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 ZNF621Q6ZSS3 439 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 FBXO30Q8TB52 745 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 SFXN5Q8TD22 340 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 MOAP1Q96BY2 351 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 ANKRD27Q96NW4 1050 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 MS4A4EQ96PG1 132 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 RASL10BQ96S79 203 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 NXF5Q9H1B4 397 aaKnown RBP12.05□□□□□ -0.48
VPS33A-202ENST00000451053 ADNPQ9H2P0 1102 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 PLA2G3Q9NZ20 509 aa12.05□□□□□ -0.48
VPS33A-202ENST00000451053 TUBD1Q9UJT1 453 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms