RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 CDK9P50750 372 aaKnown RBP17.74■□□□□ 0.43
USP40-207ENST00000450940 PCLAFQ15004 111 aa17.74■□□□□ 0.43
USP40-207ENST00000450940 KIAA0040Q15053 153 aa17.74■□□□□ 0.43
USP40-207ENST00000450940 NNATQ16517 81 aa17.74■□□□□ 0.43
USP40-207ENST00000450940 CT45A2Q5DJT8 189 aa17.74■□□□□ 0.43
USP40-207ENST00000450940 TIGD3Q6B0B8 471 aa17.74■□□□□ 0.43
USP40-207ENST00000450940 SLC30A6Q6NXT4 461 aa17.74■□□□□ 0.43
USP40-207ENST00000450940 RNF165Q6ZSG1 346 aa17.74■□□□□ 0.43
USP40-207ENST00000450940 SRRM1Q8IYB3 904 aaKnown RBP17.74■□□□□ 0.43
USP40-207ENST00000450940 OR9A2Q8NGT5 310 aa17.74■□□□□ 0.43
USP40-207ENST00000450940 KAT2AQ92830 837 aa17.74■□□□□ 0.43
USP40-207ENST00000450940 GNRHR2Q96P88 292 aa17.74■□□□□ 0.43
USP40-207ENST00000450940 TRMOQ9BU70 441 aa17.74■□□□□ 0.43
USP40-207ENST00000450940 EXO5Q9H790 373 aa17.74■□□□□ 0.43
USP40-207ENST00000450940 MYNNQ9NPC7 610 aa17.74■□□□□ 0.43
USP40-207ENST00000450940 RRAGDQ9NQL2 400 aaPredicted RBP17.74■□□□□ 0.43
USP40-207ENST00000450940 EXO1Q9UQ84 846 aaKnown RBP17.74■□□□□ 0.43
USP40-207ENST00000450940 C15orf41Q9Y2V0 281 aa17.74■□□□□ 0.43
USP40-207ENST00000450940 ELAVL4P26378 380 aaKnown RBP17.73■□□□□ 0.43
USP40-207ENST00000450940 PTPN6P29350 595 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 PTGDSP41222 190 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 TRPC1P48995 793 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 VSNL1P62760 191 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 PSPHP78330 225 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 C2orf80Q0P641 193 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 PLCXD2Q0VAA5 305 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 IMPG1Q17R60 797 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 PRSS53Q2L4Q9 553 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 C1orf185Q5T7R7 199 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 DESI1Q6ICB0 168 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 NOXRED1Q6NXP6 359 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 TRABD2AQ86V40 505 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 C10orf107Q8IVU9 208 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 ULK2Q8IYT8 1036 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 BANPQ8N9N5 519 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 CCDC63Q8NA47 563 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 OR2W6PQ8NHA6 318 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 C14orf79Q96F83 325 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 SLC35A4Q96G79 324 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 VSTM2LQ96N03 204 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 NODALQ96S42 347 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 GATA5Q9BWX5 397 aaPredicted RBP17.73■□□□□ 0.43
USP40-207ENST00000450940 STMN4Q9H169 189 aaPredicted RBP17.73■□□□□ 0.43
USP40-207ENST00000450940 ANKRA2Q9H9E1 313 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 KCNJ16Q9NPI9 418 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 PFDN4Q9NQP4 134 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 LGALS13Q9UHV8 139 aa17.73■□□□□ 0.43
USP40-207ENST00000450940 A0A0G2JNJ9 132 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 OR6C70A6NIJ9 312 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 TRIM13O60858 407 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 ICOSLGO75144 302 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 UGT2B11O75310 529 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 CRCPO75575 148 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 SLITRK5O94991 958 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 MASP1P48740 699 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 CRYZQ08257 329 aaKnown RBP17.72■□□□□ 0.43
USP40-207ENST00000450940 NHSL2Q5HYW2 709 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 IKBIPQ70UQ0 350 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 HOMEZQ8IX15 550 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 FAM9CQ8IZT9 166 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 LIX1Q8N485 282 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 OR7G2Q8NG99 324 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 RNF138Q8WVD3 245 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 APOPT1Q96IL0 206 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 BBS4Q96RK4 519 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 TIMP4Q99727 224 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 UCK2Q9BZX2 261 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 METTL7AQ9H8H3 244 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 NPDC1Q9NQX5 325 aaPredicted RBP17.72■□□□□ 0.43
USP40-207ENST00000450940 Q9UFV3 132 aa17.72■□□□□ 0.43
USP40-207ENST00000450940 A0A087WV62 115 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 TLDC2A0PJX2 215 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 AHRRA9YTQ3 701 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 FAM47E-STBD1D6RA91 191 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 PLOD2O00469 737 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 TSPAN2O60636 221 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 ERN1O75460 977 aaKnown RBP17.71■□□□□ 0.43
USP40-207ENST00000450940 SSTR2P30874 369 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 ADH7P40394 386 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 ZFP36L2P47974 494 aaKnown RBP17.71■□□□□ 0.43
USP40-207ENST00000450940 ERCC6LQ2NKX8 1250 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 RIPPLY2Q5TAB7 128 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 CLEC6AQ6EIG7 209 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 VASNQ6EMK4 673 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 Q6ZSR9 355 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 OR1J4Q8NGS1 313 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 AENQ8WTP8 325 aaKnown RBP17.71■□□□□ 0.43
USP40-207ENST00000450940 TMBIM1Q969X1 311 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 FCRL1Q96LA6 429 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 COL21A1Q96P44 957 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 OSBPL11Q9BXB4 747 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 ROPN1BQ9BZX4 212 aaPredicted RBP17.71■□□□□ 0.43
USP40-207ENST00000450940 ROPN1Q9HAT0 212 aaPredicted RBP17.71■□□□□ 0.43
USP40-207ENST00000450940 FOLH1BQ9HBA9 442 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 TAS2R9Q9NYW1 312 aa17.71■□□□□ 0.43
USP40-207ENST00000450940 POLR3HQ9Y535 204 aaPredicted RBP17.71■□□□□ 0.43
USP40-207ENST00000450940 OTOGQ6ZRI0 2925 aa17.7■□□□□ 0.42
USP40-207ENST00000450940 NKX2-6A6NCS4 301 aa17.7■□□□□ 0.42
USP40-207ENST00000450940 SLC28A1O00337 649 aa17.7■□□□□ 0.42
USP40-207ENST00000450940 AZIN1O14977 448 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms