RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 ADI1Q9BV57 179 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 ANKRD60Q9BZ19 345 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 AMBRA1Q9C0C7 1298 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 GABARAPL1Q9H0R8 117 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 SLC38A1Q9H2H9 487 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 SYNDIG1Q9H7V2 258 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 DUSP22Q9NRW4 184 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 SAMHD1Q9Y3Z3 626 aaKnown RBP13.31□□□□□ -0.28
USP39-207ENST00000450066 MMACHCQ9Y4U1 282 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 ENPP4Q9Y6X5 453 aa13.31□□□□□ -0.28
USP39-207ENST00000450066 A8MVJ9 347 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 COQ9O75208 318 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 JRKO75564 520 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 DNAJB5O75953 348 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 SOX30O94993 753 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 CBX7O95931 251 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 ALOX5P09917 674 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 FBLP22087 321 aaKnown RBP13.3□□□□□ -0.28
USP39-207ENST00000450066 MAP3K8P41279 467 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 EXOSC7Q15024 291 aaKnown RBP13.3□□□□□ -0.28
USP39-207ENST00000450066 ARHGAP11BQ3KRB8 267 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 CARM1Q86X55 608 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.3□□□□□ -0.28
USP39-207ENST00000450066 HOXB13Q92826 284 aaPredicted RBP13.3□□□□□ -0.28
USP39-207ENST00000450066 GFM1Q96RP9 751 aaKnown RBP13.3□□□□□ -0.28
USP39-207ENST00000450066 YIPF2Q9BWQ6 316 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 SMURF2Q9HAU4 748 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 UBAP1Q9NZ09 502 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 SATB2Q9UPW6 733 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 OR2W5A6NFC9 320 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 NTN3O00634 580 aaPredicted RBP13.3□□□□□ -0.28
USP39-207ENST00000450066 GALR2O43603 387 aaPredicted RBP13.3□□□□□ -0.28
USP39-207ENST00000450066 HYAL3O43820 417 aaPredicted RBP13.3□□□□□ -0.28
USP39-207ENST00000450066 SNAP29O95721 258 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 RHCEP18577 417 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 RRM2P31350 389 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 HPCAP84074 193 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 CHRNEQ04844 493 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 SLC36A3Q495N2 470 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 MLIPQ5VWP3 458 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 UGT2A3Q6UWM9 527 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 PRR23CQ6ZRP0 262 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 OLIG3Q7RTU3 272 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 SLITRK4Q8IW52 837 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 C7orf57Q8NEG2 295 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 OR52R1Q8NGF1 315 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 OR6C1Q96RD1 312 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 PIP5K1AQ99755 562 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 NECTIN3Q9NQS3 549 aa13.3□□□□□ -0.28
USP39-207ENST00000450066 FAM32AQ9Y421 112 aaKnown RBP13.3□□□□□ -0.28
USP39-207ENST00000450066 MAGEA13PA6NCF6 341 aa13.29□□□□□ -0.28
USP39-207ENST00000450066 THRBP10828 461 aa13.29□□□□□ -0.28
USP39-207ENST00000450066 PRKACGP22612 351 aa13.29□□□□□ -0.28
USP39-207ENST00000450066 DUSP8Q13202 625 aa13.29□□□□□ -0.28
USP39-207ENST00000450066 RHBDD2Q6NTF9 364 aa13.29□□□□□ -0.28
USP39-207ENST00000450066 QSOX2Q6ZRP7 698 aa13.29□□□□□ -0.28
USP39-207ENST00000450066 DHRSXQ8N5I4 330 aa13.29□□□□□ -0.28
USP39-207ENST00000450066 CHDHQ8NE62 594 aaPredicted RBP13.29□□□□□ -0.28
USP39-207ENST00000450066 PTCHD1Q96NR3 888 aa13.29□□□□□ -0.28
USP39-207ENST00000450066 MTHFD2LQ9H903 347 aaPredicted RBP13.29□□□□□ -0.28
USP39-207ENST00000450066 TESMINQ9Y4I5 508 aa13.29□□□□□ -0.28
USP39-207ENST00000450066 LYVE1Q9Y5Y7 322 aa13.29□□□□□ -0.28
USP39-207ENST00000450066 R4GN57 208 aa13.29□□□□□ -0.28
USP39-207ENST00000450066 KMT2EQ8IZD2 1858 aa13.29□□□□□ -0.28
USP39-207ENST00000450066 LNP1A1A4G5 178 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 D6RAR5 112 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 H0YAE9 185 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 FCMRO60667 390 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 ALPPP05187 535 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 GP1BAP07359 652 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 LYNP07948 512 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 PABPC4LP0CB38 370 aaKnown RBP13.28□□□□□ -0.28
USP39-207ENST00000450066 UBTFL6P0CB48 400 aaPredicted RBP13.28□□□□□ -0.28
USP39-207ENST00000450066 CAPGP40121 348 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 CHN2P52757 468 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 PDX1P52945 283 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 EPS8Q12929 822 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 ZNF605Q86T29 641 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 CYGBQ8WWM9 190 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 CNDP2Q96KP4 475 aaKnown RBP13.28□□□□□ -0.28
USP39-207ENST00000450066 SDF2Q99470 211 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 BARD1Q99728 777 aaKnown RBP13.28□□□□□ -0.28
USP39-207ENST00000450066 PINK1Q9BXM7 581 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 SIDT1Q9NXL6 827 aaKnown RBP13.28□□□□□ -0.28
USP39-207ENST00000450066 PDP1Q9P0J1 537 aaPredicted RBP13.28□□□□□ -0.28
USP39-207ENST00000450066 RARRES3Q9UL19 164 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 IGKV3D-11A0A0A0MRZ8 115 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 TNFRSF11BO00300 401 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 HS6ST1O60243 411 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 ZIC2O95409 532 aaPredicted RBP13.28□□□□□ -0.28
USP39-207ENST00000450066 LDOC1O95751 146 aaPredicted RBP13.28□□□□□ -0.28
USP39-207ENST00000450066 LGI1O95970 557 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 AK1P00568 194 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 ALBP02768 609 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 YAP1P46937 504 aaKnown RBP13.28□□□□□ -0.28
USP39-207ENST00000450066 EMDP50402 254 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 HMGA2P52926 109 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 ADARB1P78563 741 aaKnown RBP13.28□□□□□ -0.28
USP39-207ENST00000450066 FUT7Q11130 342 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 TRA2AQ13595 282 aaKnown RBP eCLIP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms