RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 MAPKAP1Q9BPZ7 522 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 ERVK-6Q9BXR3 956 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 OR10A4Q9H209 315 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 RNF122Q9H9V4 155 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 PRDM7Q9NQW5 492 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 ZDHHC18Q9NUE0 388 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 ERVK-19Q9WJR5 959 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 KCNE2Q9Y6J6 123 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 CADP27708 2225 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 SDR42E2A6NKP2 422 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 FAM157AC9JC47 383 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 TMPRSS2O15393 492 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 FGF17O60258 216 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 TNFRSF21O75509 655 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 CLEC3AO75596 197 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 ALDOAP04075 364 aaKnown RBP11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 GSTA2P09210 222 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 KRT15P19012 456 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 PTNP21246 168 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 PLTPP55058 493 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 AP1S2P56377 157 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 EEFSECP57772 596 aaKnown RBP11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 TGM3Q08188 693 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 ILF2Q12905 390 aaKnown RBP11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 FRG1Q14331 258 aaKnown RBP11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 ANKRD22Q5VYY1 191 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 FAM214BQ7L5A3 538 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 THOC6Q86W42 341 aaKnown RBP11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 UBQLNLQ8IYU4 475 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 MYO1HQ8N1T3 1032 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 LRRC17Q8N6Y2 441 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 WDSUB1Q8N9V3 476 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 KBTBD8Q8NFY9 601 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 FBXO25Q8TCJ0 367 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 CACNG6Q9BXT2 260 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 PARD6BQ9BYG5 372 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 TRIM2Q9C040 744 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 ANKZF1Q9H8Y5 726 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 FBXO6Q9NRD1 293 aaPredicted RBP11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 TRMT6Q9UJA5 497 aaKnown RBP11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 METRNQ9UJH8 293 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 RAB21Q9UL25 225 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 SNX8Q9Y5X2 465 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 COMMD10Q9Y6G5 202 aa11.27□□□□□ -0.61
AC004540.1-204ENST00000449537 ESYT3A0FGR9 886 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 ANKDD1BA6NHY2 528 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 TP73O15350 636 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 ABCB1P08183 1280 aaPredicted RBP11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 F7P08709 466 aaPredicted RBP11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 CSF3P09919 207 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 PEPDP12955 493 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 APEHP13798 732 aaKnown RBP11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 ALOX15P16050 662 aaPredicted RBP11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 PGAM1P18669 254 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 CPN2P22792 545 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 GSTM2P28161 218 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 SRD5A2P31213 254 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 NEK2P51955 445 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 RPS13P62277 151 aaKnown RBP11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 GUSBP1Q15486 140 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 ADPRMQ3LIE5 342 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 EMBQ6PCB8 327 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 ZDHHC24Q6UX98 284 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 BEND4Q6ZU67 534 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 LMNTD2Q8IXW0 634 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 PRR22Q8IZ63 422 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 STEAP2Q8NFT2 490 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 FNDC9Q8TBE3 224 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 DTNBP1Q96EV8 351 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 OSBPL11Q9BXB4 747 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 PINK1Q9BXM7 581 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 SOX13Q9UN79 622 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 SLC22A14Q9Y267 594 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 MRPS18CQ9Y3D5 142 aaKnown RBP11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 ZNF175Q9Y473 711 aa11.26□□□□□ -0.61
AC004540.1-204ENST00000449537 TCRBV7S3A2A0A539 114 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 GUCA1CO95843 209 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 C1GALT1C1LP0DN25 315 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 H2AFXP16104 143 aaPredicted RBP11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 MGAT1P26572 445 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 ECHS1P30084 290 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 ZNF844Q08AG5 666 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 SNTA1Q13424 505 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 GGTLC2Q14390 218 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 SPRED3Q2MJR0 410 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 CTU2Q2VPK5 515 aaKnown RBP11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 ZNF470Q6ECI4 717 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 TMEM81Q6P7N7 255 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 TREML4Q6UXN2 200 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 NUP54Q7Z3B4 507 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 DENND6AQ8IWF6 608 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 ST13P4Q8IZP2 240 aaPredicted RBP11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 SEMA6DQ8NFY4 1073 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 IFT81Q8WYA0 676 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 HTRA1Q92743 480 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 RIT1Q92963 219 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 PELOQ9BRX2 385 aaKnown RBP11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 PRR14Q9BWN1 585 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 HDHD5Q9BXW7 423 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 BHLHE41Q9C0J9 482 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms