RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 ACOT7O00154 380 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 PIP5K1BO14986 540 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 RGS16O15492 202 aaPredicted RBP12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 CDC40O60508 579 aaKnown RBP eCLIP12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 HCN1O60741 890 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 ATP6AP2O75787 350 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 SNX4O95219 450 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 NEFHP12036 1026 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 BCKDHAP12694 445 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 SDC1P18827 310 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 ENDOUP21128 410 aaKnown RBP12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 NRG3P56975 720 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 KCNJ2P63252 427 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 PDE7AQ13946 482 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 TBCELQ5QJ74 424 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 C6orf163Q5TEZ5 329 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 SP5Q6BEB4 398 aaPredicted RBP12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 ZNF787Q6DD87 383 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 PAOXQ6QHF9 649 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 NPSR1Q6W5P4 371 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 FAM9CQ8IZT9 166 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 OR2L13Q8N349 312 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 TWIST2Q8WVJ9 160 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 RILPQ96NA2 401 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 BBS4Q96RK4 519 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 NODALQ96S42 347 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 CCT7Q99832 543 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 STMN4Q9H169 189 aaPredicted RBP12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 ZNF395Q9H8N7 513 aaPredicted RBP12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 GIMAP4Q9NUV9 329 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 QPCTLQ9NXS2 382 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 FIS1Q9Y3D6 152 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 KLF2Q9Y5W3 355 aaPredicted RBP12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 ACTL7BQ9Y614 415 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 TACC2O95359 2948 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 CACNA1CQ13936 2221 aa12.89□□□□□ -0.35
RTFDC1-204ENST00000449062 POLQO75417 2590 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 FREM3P0C091 2139 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 OR14I1A6ND48 311 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 NPIPA2E9PIF3 369 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 NPIPA3F8WFD2 350 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 UPK1AO00322 258 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 AQP7O14520 342 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 BIRC5O15392 142 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 ITM2AO43736 263 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 TSPAN2O60636 221 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 UGT2B11O75310 529 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 SLITRK5O94991 958 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 JUNP05412 331 aaKnown RBP12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 TPOP07202 933 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 IFI6P09912 130 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 ESRRAP11474 423 aaPredicted RBP12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 GRNP28799 593 aaKnown RBP12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 MAP3K8P41279 467 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 FRKP42685 505 aaPredicted RBP12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 TMED10P49755 219 aaKnown RBP12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 CORO7P57737 925 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 PSG6Q00889 435 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 NNATQ16517 81 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 ZNF630Q2M218 657 aaPredicted RBP12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 ZNF385BQ569K4 471 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 C6orf136Q5SQH8 315 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 SH2D4BQ5SQS7 431 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 CEP85LQ5SZL2 805 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 TIGD3Q6B0B8 471 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 RTL6Q6ICC9 239 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 LRIG3Q6UXM1 1119 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 CD163Q86VB7 1156 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 NUDCD3Q8IVD9 361 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 SLC34A3Q8N130 599 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 RPRMLQ8N4K4 120 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 OMA1Q96E52 524 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 ELP4Q96EB1 424 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 SLC35A4Q96G79 324 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 DOHHQ9BU89 302 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 C20orf27Q9GZN8 174 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 FOLH1BQ9HBA9 442 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 PFDN4Q9NQP4 134 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 NTMQ9P121 344 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 GIMAP2Q9UG22 337 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 BOKQ9UMX3 212 aaPredicted RBP12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 ENTPD4Q9Y227 616 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 TMED5Q9Y3A6 229 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 DCHS2Q6V1P9 2916 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 MYO9AB2RTY4 2548 aa12.88□□□□□ -0.35
RTFDC1-204ENST00000449062 OR6C70A6NIJ9 312 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 ICOSLGO75144 302 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 ERN1O75460 977 aaKnown RBP12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 CHEK2O96017 543 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 MC3RP41968 323 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 NCBP2P52298 156 aaKnown RBP eCLIP12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 SNTA1Q13424 505 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 BEND6Q5SZJ8 279 aaPredicted RBP12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 TMEM198Q66K66 360 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 ANKRD26P1Q6NSI1 321 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 ZNF551Q7Z340 670 aaPredicted RBP12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 OR4N2Q8NGD1 307 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 CDC26Q8NHZ8 85 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 HOXB13Q92826 284 aaPredicted RBP12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 GFM2Q969S9 779 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms