RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 SORT1Q99523 831 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 REEP4Q9H6H4 257 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 ANKRA2Q9H9E1 313 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 DDX18Q9NVP1 670 aaKnown RBP13.42□□□□□ -0.26
USP39-206ENST00000448971 SH3BP4Q9P0V3 963 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 BAIAP2L1Q9UHR4 511 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 ZNF639Q9UID6 485 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 NPIPA1Q9UND3 350 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 EXO1Q9UQ84 846 aaKnown RBP13.42□□□□□ -0.26
USP39-206ENST00000448971 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.42□□□□□ -0.26
USP39-206ENST00000448971 NCOA6Q14686 2063 aaPredicted RBP13.42□□□□□ -0.26
USP39-206ENST00000448971 SPG11Q96JI7 2443 aa13.42□□□□□ -0.26
USP39-206ENST00000448971 A0A0G2JMM0 328 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 A0A1W2PPB8 328 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 A0A1W2PRS3 328 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 KIR3DP1A8MWS1 328 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 MYO1GB0I1T2 1018 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 COQ9O75208 318 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 WISP2O76076 250 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 SLITRK5O94991 958 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 FBXO45P0C2W1 286 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 S1PR1P21453 382 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 HTR1EP28566 365 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 GPC1P35052 558 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 RPL3P39023 403 aaKnown RBP13.41□□□□□ -0.26
USP39-206ENST00000448971 KCNJ2P63252 427 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 RBPJQ06330 500 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 MAD2L1Q13257 205 aaPredicted RBP13.41□□□□□ -0.26
USP39-206ENST00000448971 PRSS53Q2L4Q9 553 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 ZNF791Q3KP31 576 aaPredicted RBP13.41□□□□□ -0.26
USP39-206ENST00000448971 C6orf136Q5SQH8 315 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 IL23RQ5VWK5 629 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 ATG16L1Q676U5 607 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 LYPD8Q6UX82 237 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 TMEM64Q6YI46 380 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 BNC2Q6ZN30 1099 aaPredicted RBP13.41□□□□□ -0.26
USP39-206ENST00000448971 SZRD1Q7Z422 152 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 R3HCC1LQ7Z5L2 792 aaKnown RBP13.41□□□□□ -0.26
USP39-206ENST00000448971 MRGPRGQ86SM5 289 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 ZNF808Q8N4W9 903 aaPredicted RBP13.41□□□□□ -0.26
USP39-206ENST00000448971 C17orf47Q8NEP4 570 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 OR2M7Q8NG81 312 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 OR7G2Q8NG99 324 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 OR10G3Q8NGC4 313 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 ADIPOR1Q96A54 375 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 ERP27Q96DN0 273 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 MAGED4Q96JG8 741 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 GPR137Q96N19 417 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 NUF2Q9BZD4 464 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 NXF5Q9H1B4 397 aaKnown RBP13.41□□□□□ -0.26
USP39-206ENST00000448971 GLIPR2Q9H4G4 154 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 CHST11Q9NPF2 352 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 DEPPQ9NTK1 212 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 MARCOQ9UEW3 520 aaPredicted RBP13.41□□□□□ -0.26
USP39-206ENST00000448971 EIF3LQ9Y262 564 aaKnown RBP13.41□□□□□ -0.26
USP39-206ENST00000448971 NF1P21359 2839 aa13.41□□□□□ -0.26
USP39-206ENST00000448971 TRGV8A0A0C4DH27 118 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 FAM166BA8MTA8 275 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 CCL21O00585 134 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 TP53I11O14683 189 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 SCAMP2O15127 329 aaKnown RBP13.4□□□□□ -0.26
USP39-206ENST00000448971 HS6ST1O60243 411 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 PRPS2P11908 318 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 SOX18P35713 384 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 CA7P43166 264 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 DNASE1L1P49184 302 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 DCAF7P61962 342 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 PTGR1Q14914 329 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 ZNF385BQ569K4 471 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 TTMPQ5BVD1 217 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 SLC22A10Q63ZE4 541 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 GDF7Q7Z4P5 450 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 ZNF295-AS1Q8N0V1 137 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 FBXW8Q8N3Y1 598 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 ZFP62Q8NB50 900 aaPredicted RBP13.4□□□□□ -0.26
USP39-206ENST00000448971 RAB3IL1Q8TBN0 382 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 PAQR8Q8TEZ7 354 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 CIDECQ96AQ7 238 aaPredicted RBP13.4□□□□□ -0.26
USP39-206ENST00000448971 ZBED6CLQ96FA7 236 aaPredicted RBP13.4□□□□□ -0.26
USP39-206ENST00000448971 ZNF764Q96H86 408 aaPredicted RBP13.4□□□□□ -0.26
USP39-206ENST00000448971 LCORQ96JN0 433 aaPredicted RBP13.4□□□□□ -0.26
USP39-206ENST00000448971 AMDHD1Q96NU7 426 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 FAM173AQ9BQD7 235 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 TRIM8Q9BZR9 551 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 VIPAS39Q9H9C1 493 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 THAP1Q9NVV9 213 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 TAS2R9Q9NYW1 312 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 TAS2R7Q9NYW3 318 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 NOP53Q9NZM5 478 aaKnown RBP13.4□□□□□ -0.26
USP39-206ENST00000448971 NPFFR2Q9Y5X5 522 aa13.4□□□□□ -0.26
USP39-206ENST00000448971 PINLYPA6NC86 204 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 FRG2CA6NGY1 282 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 ACOX3O15254 700 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 CDC40O60508 579 aaKnown RBP eCLIP13.39□□□□□ -0.27
USP39-206ENST00000448971 PLOD3O60568 738 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 ERN1O75460 977 aaKnown RBP13.39□□□□□ -0.27
USP39-206ENST00000448971 CNR1P21554 472 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 ABCD3P28288 659 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 KRT20P35900 424 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 PIGAP37287 484 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms