RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 NUBPLQ8TB37 319 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 DOK4Q8TEW6 326 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 KLHL29Q96CT2 875 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 ATP6V1G3Q96LB4 118 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 PPP3R2Q96LZ3 170 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 C3orf30Q96M34 536 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 SORT1Q99523 831 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 SH3GL2Q99962 352 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 CNPPD1Q9BV87 410 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 LIN28AQ9H9Z2 209 aaKnown RBP11.47□□□□□ -0.57
SSR4-205ENST00000447375 PFDN4Q9NQP4 134 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 SLC35C2Q9NQQ7 365 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 NKIRAS1Q9NYS0 192 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 UTS2RQ9UKP6 389 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 EXO1Q9UQ84 846 aaKnown RBP11.47□□□□□ -0.57
SSR4-205ENST00000447375 ERVK-19Q9WJR5 959 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 TMED5Q9Y3A6 229 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 POLR3HQ9Y535 204 aaPredicted RBP11.47□□□□□ -0.57
SSR4-205ENST00000447375 NSD1Q96L73 2696 aaPredicted RBP11.47□□□□□ -0.57
SSR4-205ENST00000447375 A0A1B0GTH9 108 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 OR6C76A6NM76 312 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 WWP2O00308 870 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 OR2J2O76002 312 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 RAF1P04049 648 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 CT62P0C5K7 136 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 ZNF24P17028 368 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 NT5EP21589 574 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 TACR1P25103 407 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 PTGER1P34995 402 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 SOX18P35713 384 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 RPL14P50914 215 aaKnown RBP11.46□□□□□ -0.57
SSR4-205ENST00000447375 SSR4P51571 173 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 DLX5P56178 289 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 OC90Q02509 493 aaPredicted RBP11.46□□□□□ -0.57
SSR4-205ENST00000447375 DUSP2Q05923 314 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 BST1Q10588 318 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 PMPCAQ10713 525 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 MPEG1Q2M385 716 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 PRICKLE4Q2TBC4 344 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 PIGGQ5H8A4 983 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 RNFT1Q5M7Z0 435 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 FAM180BQ6P0A1 224 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 ARSKQ6UWY0 536 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 PAMR1Q6UXH9 720 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 RNF111Q6ZNA4 994 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 IKBIPQ70UQ0 350 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 KIRREL3Q8IZU9 778 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 LRRC25Q8N386 305 aaPredicted RBP11.46□□□□□ -0.57
SSR4-205ENST00000447375 CPSF7Q8N684 471 aaKnown RBP11.46□□□□□ -0.57
SSR4-205ENST00000447375 ZNF781Q8N8C0 355 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 ZNF615Q8N8J6 731 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 OR7G1Q8NGA0 311 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 MGARPQ8TDB4 240 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 CTHRC1Q96CG8 243 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 EGLN2Q96KS0 407 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 RYDENQ9NUL5 291 aaKnown RBP11.46□□□□□ -0.57
SSR4-205ENST00000447375 ZNF639Q9UID6 485 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 ADAM21Q9UKJ8 722 aa11.46□□□□□ -0.57
SSR4-205ENST00000447375 PHF3Q92576 2039 aaKnown RBP11.46□□□□□ -0.57
SSR4-205ENST00000447375 ATP6AP2A0A1C7CYW4 349 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 MYO1GB0I1T2 1018 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 PEX11AO75192 247 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 SNNO75324 88 aaPredicted RBP11.45□□□□□ -0.58
SSR4-205ENST00000447375 ATP6AP2O75787 350 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 ATE1O95260 518 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 SP1P08047 785 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 BCKDHAP12694 445 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 SDC1P18827 310 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 SSTR4P31391 388 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 KEAP1Q14145 624 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 PRSS53Q2L4Q9 553 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 GALNTL6Q49A17 601 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 C6orf136Q5SQH8 315 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 SLC25A25Q6KCM7 469 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 FAM111BQ6SJ93 734 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 SLC29A4Q7RTT9 530 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 GPALPP1Q8IXQ4 340 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 CCDC116Q8IYX3 515 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 VWA5B2Q8N398 1253 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 TMEM156Q8N614 296 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 RAB3IL1Q8TBN0 382 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 EXOSC8Q96B26 276 aaKnown RBP11.45□□□□□ -0.58
SSR4-205ENST00000447375 ZNF764Q96H86 408 aaPredicted RBP11.45□□□□□ -0.58
SSR4-205ENST00000447375 RASL10BQ96S79 203 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 OR10A5Q9H207 317 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 TP63Q9H3D4 680 aaPredicted RBP11.45□□□□□ -0.58
SSR4-205ENST00000447375 GIMAP4Q9NUV9 329 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 THAP1Q9NVV9 213 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 MAT2BQ9NZL9 334 aa11.45□□□□□ -0.58
SSR4-205ENST00000447375 COL6A5A8TX70 2615 aa11.44□□□□□ -0.58
SSR4-205ENST00000447375 FREM3P0C091 2139 aa11.44□□□□□ -0.58
SSR4-205ENST00000447375 ZNF354AO60765 605 aaPredicted RBP11.44□□□□□ -0.58
SSR4-205ENST00000447375 TBX19O60806 448 aa11.44□□□□□ -0.58
SSR4-205ENST00000447375 SKAP2O75563 359 aaPredicted RBP11.44□□□□□ -0.58
SSR4-205ENST00000447375 SLC25A12O75746 678 aa11.44□□□□□ -0.58
SSR4-205ENST00000447375 JUNP05412 331 aaKnown RBP11.44□□□□□ -0.58
SSR4-205ENST00000447375 MPIP34949 423 aa11.44□□□□□ -0.58
SSR4-205ENST00000447375 KIR2DL3P43628 341 aa11.44□□□□□ -0.58
SSR4-205ENST00000447375 ASMTP46597 345 aa11.44□□□□□ -0.58
SSR4-205ENST00000447375 NUP107P57740 925 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms