RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 A4GNTQ9UNA3 340 aa14.68□□□□□ -0.06
SNX13-204ENST00000444712 ZNF232Q9UNY5 417 aa14.68□□□□□ -0.06
SNX13-204ENST00000444712 KCNE3Q9Y6H6 103 aa14.68□□□□□ -0.06
SNX13-204ENST00000444712 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 K7ESF4 209 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 M0R3H8 397 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 FAM20BO75063 409 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 LDB3O75112 727 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 DNAJB6O75190 326 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 NSA2O95478 260 aaKnown RBP14.67□□□□□ -0.06
SNX13-204ENST00000444712 SLC35E2P0CK97 266 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 DCKP27707 260 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 EPHA2P29317 976 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 EMP3P54852 163 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 CDC42P60953 191 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 SLC35A2P78381 396 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 CHRNEQ04844 493 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 PRICKLE4Q2TBC4 344 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 EIPR1Q53HC9 387 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 TMEFF1Q8IYR6 380 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 ENTHD1Q8IYW4 607 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 SLC16A11Q8NCK7 471 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 OR4D11Q8NGI4 311 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 OR13F1Q8NGS4 319 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 FAM81AQ8TBF8 368 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 GUCD1Q96NT3 240 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 ARHGDIGQ99819 225 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 DGCR6LQ9BY27 220 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 ANKRD19PQ9H560 264 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 STARD5Q9NSY2 213 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 SOHLH2Q9NX45 425 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 WDR45Q9Y484 360 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 SPTBN5Q9NRC6 3674 aaKnown RBP14.67□□□□□ -0.06
SNX13-204ENST00000444712 UNC80Q8N2C7 3258 aa14.67□□□□□ -0.06
SNX13-204ENST00000444712 CCDC163A0A0D9SF12 145 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 TRBV4-1A0A0J9YWV2 114 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 CHST10O43529 356 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 OR10H3O60404 316 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 ITIH1P19827 911 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 BCKDHBP21953 392 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 FMO3P31513 532 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 CSNK1EP49674 416 aaKnown RBP14.66□□□□□ -0.06
SNX13-204ENST00000444712 MVKQ03426 396 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 LSAMPQ13449 338 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 LARS2Q15031 903 aaKnown RBP14.66□□□□□ -0.06
SNX13-204ENST00000444712 MLIPQ5VWP3 458 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 MAMSTRQ6ZN01 415 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 Q7L0L9 218 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 ERI1Q8IV48 349 aaKnown RBP14.66□□□□□ -0.06
SNX13-204ENST00000444712 ZNF595Q8IYB9 648 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 OR9A4Q8NGU2 314 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 OR52P1PQ8NH57 321 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 CDS1Q92903 461 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 GTPBP3Q969Y2 492 aaKnown RBP14.66□□□□□ -0.06
SNX13-204ENST00000444712 ISOC1Q96CN7 298 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 AHCYL2Q96HN2 611 aaKnown RBP14.66□□□□□ -0.06
SNX13-204ENST00000444712 SCN2AQ99250 2005 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 UCK2Q9BZX2 261 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 EVA1AQ9H8M9 152 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 ANKRA2Q9H9E1 313 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 PLCXD1Q9NUJ7 323 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 IMPAD1Q9NX62 359 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 MAT2BQ9NZL9 334 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 RNF6Q9Y252 685 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 SH3PXD2BA1X283 911 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 HYKKA2RU49 373 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 C19orf67A6NJJ6 358 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 PTGES3LE9PB15 166 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 CLDN4O14493 209 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 SEC14L2O76054 403 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 ZBTB11O95625 1053 aaPredicted RBP14.66□□□□□ -0.06
SNX13-204ENST00000444712 GASTP01350 101 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 THBS1P07996 1170 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 OSMP13725 252 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 AVPR1BP47901 424 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 CRISP1P54107 249 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 COX10Q12887 443 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 INAVAQ3KP66 663 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 EXOSC6Q5RKV6 272 aaKnown RBP14.66□□□□□ -0.06
SNX13-204ENST00000444712 XAF1Q6GPH4 301 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 KLHL17Q6TDP4 642 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 FRRS1Q6ZNA5 592 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 LACC1Q8IV20 430 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 ZNF540Q8NDQ6 660 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 TMEM52Q8NDY8 209 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 ANKRD9Q96BM1 317 aaPredicted RBP14.66□□□□□ -0.06
SNX13-204ENST00000444712 FUZQ9BT04 418 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 RSPO3Q9BXY4 272 aaPredicted RBP14.66□□□□□ -0.06
SNX13-204ENST00000444712 CCDC90BQ9GZT6 254 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 ADAP2Q9NPF8 381 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 POLE3Q9NRF9 147 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 TMEM74BQ9NUR3 256 aa14.66□□□□□ -0.06
SNX13-204ENST00000444712 SPAG17Q6Q759 2223 aa14.65□□□□□ -0.06
SNX13-204ENST00000444712 HCRTR1O43613 425 aa14.65□□□□□ -0.06
SNX13-204ENST00000444712 RGS10O43665 173 aa14.65□□□□□ -0.06
SNX13-204ENST00000444712 NUDT21O43809 227 aaKnown RBP14.65□□□□□ -0.06
SNX13-204ENST00000444712 XPNPEP2O43895 674 aa14.65□□□□□ -0.06
SNX13-204ENST00000444712 PCDHGA12O60330 932 aa14.65□□□□□ -0.06
SNX13-204ENST00000444712 OR10H2O60403 315 aa14.65□□□□□ -0.06
SNX13-204ENST00000444712 TRMUO75648 421 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms