RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 SEC14L5O43304 696 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 CEP104O60308 925 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 LYZL6O75951 148 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 TUBBP07437 444 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 ZNF888P0CJ79 500 aaPredicted RBP6.16□□□□□ -1.42
SSXP3-201ENST00000442971 RBMY1A1P0DJD3 496 aaKnown RBP6.16□□□□□ -1.42
SSXP3-201ENST00000442971 ZSCAN22P10073 491 aaPredicted RBP6.16□□□□□ -1.42
SSXP3-201ENST00000442971 ERGP11308 486 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 ZNF17P17021 662 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 TCEA1P23193 301 aaKnown RBP6.16□□□□□ -1.42
SSXP3-201ENST00000442971 PSMA2P25787 234 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 SRD5A2P31213 254 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 HOXD3P31249 432 aaPredicted RBP6.16□□□□□ -1.42
SSXP3-201ENST00000442971 COILP38432 576 aaPredicted RBP6.16□□□□□ -1.42
SSXP3-201ENST00000442971 NPY2RP49146 381 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 RPP38P78345 283 aaKnown RBP6.16□□□□□ -1.42
SSXP3-201ENST00000442971 IFI35P80217 286 aaPredicted RBP6.16□□□□□ -1.42
SSXP3-201ENST00000442971 CCZ1BP86790 482 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 CCZ1P86791 482 aaPredicted RBP6.16□□□□□ -1.42
SSXP3-201ENST00000442971 LRRC63Q05C16 580 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 MSLNQ13421 630 aaPredicted RBP6.16□□□□□ -1.42
SSXP3-201ENST00000442971 SGCBQ16585 318 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 ZNF470Q6ECI4 717 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 MFSD12Q6NUT3 480 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 TFAP2EQ6VUC0 442 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 TMEM64Q6YI46 380 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 RNF111Q6ZNA4 994 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 Q6ZSV7 163 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 CLNKQ7Z7G1 428 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 TRIM59Q8IWR1 403 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 ALDH16A1Q8IZ83 802 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 CA13Q8N1Q1 262 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 RIBC1Q8N443 379 aaPredicted RBP6.16□□□□□ -1.42
SSXP3-201ENST00000442971 ZSCAN4Q8NAM6 433 aaPredicted RBP6.16□□□□□ -1.42
SSXP3-201ENST00000442971 CFHR4Q92496 578 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 DYRK2Q92630 601 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 R3HDM4Q96D70 268 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 CEP63Q96MT8 703 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 FAM129AQ9BZQ8 928 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 PLK3Q9H4B4 646 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 GLRX2Q9NS18 164 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 TMEM184CQ9NVA4 438 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 SEC14L4Q9UDX3 406 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 VTI1BQ9UEU0 232 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 AMFRQ9UKV5 643 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.16□□□□□ -1.42
SSXP3-201ENST00000442971 MRFAP1Q9Y605 127 aa6.16□□□□□ -1.42
SSXP3-201ENST00000442971 CCDC151A5D8V7 595 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 SYNDIG1LA6NDD5 238 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 LCMT2O60294 686 aaKnown RBP6.15□□□□□ -1.43
SSXP3-201ENST00000442971 DEAF1O75398 565 aaPredicted RBP6.15□□□□□ -1.43
SSXP3-201ENST00000442971 RNF8O76064 485 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 ETHE1O95571 254 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 EPOP01588 193 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 CALB1P05937 261 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 RHOXF2BP0C7M4 288 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 OR56A5P0C7T3 313 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 AGTR1P30556 359 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 MC4RP32245 332 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 ARHGAP25P42331 645 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 TNNT3P45378 269 aaPredicted RBP6.15□□□□□ -1.43
SSXP3-201ENST00000442971 HNRNPFP52597 415 aaKnown RBP6.15□□□□□ -1.43
SSXP3-201ENST00000442971 WNT3AP56704 352 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 RPS3AP61247 264 aaKnown RBP6.15□□□□□ -1.43
SSXP3-201ENST00000442971 CUL4AQ13619 759 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 PAFAH1B3Q15102 231 aaKnown RBP6.15□□□□□ -1.43
SSXP3-201ENST00000442971 TAF1AQ15573 450 aaPredicted RBP6.15□□□□□ -1.43
SSXP3-201ENST00000442971 SLC1A5Q15758 541 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 LINC00114Q6XXX2 140 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 MICALCLQ6ZW33 695 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 WDFY1Q8IWB7 410 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 LYG1Q8N1E2 194 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 TMEM86BQ8N661 226 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 WDSUB1Q8N9V3 476 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 TMEM52Q8NDY8 209 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 DEFB108BQ8NET1 73 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 OR13C4Q8NGS5 318 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 LINC00476Q8WZB0 136 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 RAB39BQ96DA2 213 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 DNAJC1Q96KC8 554 aaKnown RBP6.15□□□□□ -1.43
SSXP3-201ENST00000442971 GAL3ST4Q96RP7 486 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 PRDM13Q9H4Q3 707 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 METTL7AQ9H8H3 244 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 ABCF3Q9NUQ8 709 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 ANAPC7Q9UJX3 599 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 ADAMTS6Q9UKP5 1117 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 AUP1Q9Y679 476 aa6.15□□□□□ -1.43
SSXP3-201ENST00000442971 PCNX3Q9H6A9 2034 aa6.14□□□□□ -1.43
SSXP3-201ENST00000442971 OR5H1A6NKK0 313 aa6.14□□□□□ -1.43
SSXP3-201ENST00000442971 ZNF839A8K0R7 811 aa6.14□□□□□ -1.43
SSXP3-201ENST00000442971 ATP6V1G2-DDX39BF2Z307 99 aa6.14□□□□□ -1.43
SSXP3-201ENST00000442971 CCL22O00626 93 aa6.14□□□□□ -1.43
SSXP3-201ENST00000442971 NDUFS4O43181 175 aa6.14□□□□□ -1.43
SSXP3-201ENST00000442971 PPIHO43447 177 aaKnown RBP6.14□□□□□ -1.43
SSXP3-201ENST00000442971 ZIC3O60481 467 aa6.14□□□□□ -1.43
SSXP3-201ENST00000442971 ZNF432O94892 652 aa6.14□□□□□ -1.43
SSXP3-201ENST00000442971 LY6G6CO95867 125 aa6.14□□□□□ -1.43
SSXP3-201ENST00000442971 ATP1A3P13637 1013 aa6.14□□□□□ -1.43
SSXP3-201ENST00000442971 GGT1P19440 569 aa6.14□□□□□ -1.43
SSXP3-201ENST00000442971 NSFP46459 744 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms