RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ZNF678Q5SXM1 525 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 TMEM81Q6P7N7 255 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 ENPP6Q6UWR7 440 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 SEM1Q6ZVN7 128 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 TRMT10CQ7L0Y3 403 aaKnown RBP10.75□□□□□ -0.69
TTC28-203ENST00000442232 YRDCQ86U90 279 aaKnown RBP10.75□□□□□ -0.69
TTC28-203ENST00000442232 IFT20Q8IY31 132 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 MMP21Q8N119 569 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 RELL2Q8NC24 303 aaPredicted RBP10.75□□□□□ -0.69
TTC28-203ENST00000442232 CHDHQ8NE62 594 aaPredicted RBP10.75□□□□□ -0.69
TTC28-203ENST00000442232 ZNF675Q8TD23 568 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 FAM222BQ8WU58 562 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 HGDQ93099 445 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 EXOSC8Q96B26 276 aaKnown RBP10.75□□□□□ -0.69
TTC28-203ENST00000442232 ERP27Q96DN0 273 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 COL21A1Q96P44 957 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 TMEM237Q96Q45 408 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 SHCBP1LQ9BZQ2 653 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 CLEC4MQ9H2X3 399 aaPredicted RBP10.75□□□□□ -0.69
TTC28-203ENST00000442232 CALHM2Q9HA72 323 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 EHD3Q9NZN3 535 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 CRIM1Q9NZV1 1036 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 ZNF639Q9UID6 485 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 DKKL1Q9UK85 242 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 DLGAP4Q9Y2H0 992 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 A0A1B0GTL3 188 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 OR6C70A6NIJ9 312 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 KIF2AO00139 706 aaPredicted RBP10.74□□□□□ -0.69
TTC28-203ENST00000442232 PPP6CO00743 305 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 TO15178 435 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 ICOSLGO75144 302 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 ERN1O75460 977 aaKnown RBP10.74□□□□□ -0.69
TTC28-203ENST00000442232 CRCPO75575 148 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 CTAG2O75638 210 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 ENO1P06733 434 aaKnown RBP10.74□□□□□ -0.69
TTC28-203ENST00000442232 DRD5P21918 477 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 TACR1P25103 407 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 CTSSP25774 331 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 DGKQP52824 942 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 MRPS35P82673 323 aaKnown RBP10.74□□□□□ -0.69
TTC28-203ENST00000442232 MGAT2Q10469 447 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 LCP2Q13094 533 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 SNTB1Q13884 538 aaKnown RBP10.74□□□□□ -0.69
TTC28-203ENST00000442232 IMPG1Q17R60 797 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 FBXL19-AS1Q494R0 122 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 TRMT12Q53H54 448 aaKnown RBP10.74□□□□□ -0.69
TTC28-203ENST00000442232 UNC50Q53HI1 259 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 TCHHL1Q5QJ38 904 aaPredicted RBP10.74□□□□□ -0.69
TTC28-203ENST00000442232 FNDC7Q5VTL7 733 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 AAGABQ6PD74 315 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 TIFABQ6ZNK6 161 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 IFNEQ86WN2 208 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 CCDC116Q8IYX3 515 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 FAM9CQ8IZT9 166 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 CEP112Q8N8E3 955 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 NAXEQ8NCW5 288 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 CDC26Q8NHZ8 85 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 RDH11Q8TC12 318 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 TMBIM1Q969X1 311 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 CCDC126Q96EE4 140 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 CNRIP1Q96F85 164 aaPredicted RBP10.74□□□□□ -0.69
TTC28-203ENST00000442232 WDYHV1Q96HA8 205 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 ZFP3Q96NJ6 502 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 BBS4Q96RK4 519 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 NODALQ96S42 347 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 SH3GL2Q99962 352 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 ACBD3Q9H3P7 528 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 GALNT9Q9HCQ5 603 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 SERHLQ9NQF3 203 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 PSMC3IPQ9P2W1 217 aaPredicted RBP10.74□□□□□ -0.69
TTC28-203ENST00000442232 EXO1Q9UQ84 846 aaKnown RBP10.74□□□□□ -0.69
TTC28-203ENST00000442232 OR10H1Q9Y4A9 318 aa10.74□□□□□ -0.69
TTC28-203ENST00000442232 C2orf72A6NCS6 295 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 MBD3L4A6NDZ8 208 aaPredicted RBP10.73□□□□□ -0.69
TTC28-203ENST00000442232 MBD3L3A6NE82 208 aaPredicted RBP10.73□□□□□ -0.69
TTC28-203ENST00000442232 TUBAL3A6NHL2 446 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 MBD3L5A6NJ08 208 aaPredicted RBP10.73□□□□□ -0.69
TTC28-203ENST00000442232 A6NNC1 897 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 DLX3O60479 287 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 COQ9O75208 318 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 UGT2B11O75310 529 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 GSTA1P08263 222 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 SBK3P0C264 359 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 TMIGD3P0DMS9 266 aaPredicted RBP10.73□□□□□ -0.69
TTC28-203ENST00000442232 IMPDH1P20839 514 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 ECHS1P30084 290 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 TIA1P31483 386 aaKnown RBP eCLIP10.73□□□□□ -0.69
TTC28-203ENST00000442232 MPIP34949 423 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 CPA2P48052 419 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 EMDP50402 254 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 ZNF136P52737 540 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 IST1P53990 364 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 NAGLUP54802 743 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 NAA20P61599 178 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 PPP2R2AP63151 447 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 SRYQ05066 204 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 ZNF155Q12901 538 aaPredicted RBP10.73□□□□□ -0.69
TTC28-203ENST00000442232 ZNF628Q5EBL2 1059 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 SPDYAQ5MJ70 313 aa10.73□□□□□ -0.69
TTC28-203ENST00000442232 DCST1Q5T197 706 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms