RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 NCLNQ969V3 563 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 CNRIP1Q96F85 164 aaPredicted RBP7.6□□□□□ -1.19
CCDC39-201ENST00000442201 SLC41A2Q96JW4 573 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 SPATA9Q9BWV2 254 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 GLIPR2Q9H4G4 154 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 GORASP2Q9H8Y8 452 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 AKIP1Q9NQ31 210 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 OLAHQ9NV23 265 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 ACSL6Q9UKU0 697 aa7.6□□□□□ -1.19
CCDC39-201ENST00000442201 A0A0A6YYC8 382 aaPredicted RBP7.59□□□□□ -1.19
CCDC39-201ENST00000442201 DHRS12A0PJE2 317 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 MYO1GB0I1T2 1018 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 I3L1I5 382 aaPredicted RBP7.59□□□□□ -1.19
CCDC39-201ENST00000442201 CXCR6O00574 342 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 DNAJB6O75190 326 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 RDH16O75452 317 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 OR2B3O76000 313 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 KCNK5O95279 499 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 HMGN1P05114 100 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 GPIP06744 558 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 CKMT1AP12532 417 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 NELFEP18615 380 aaKnown RBP7.59□□□□□ -1.19
CCDC39-201ENST00000442201 PSMA4P25789 261 aaKnown RBP7.59□□□□□ -1.19
CCDC39-201ENST00000442201 SLC7A1P30825 629 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 KRT20P35900 424 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 FEN1P39748 380 aaKnown RBP7.59□□□□□ -1.19
CCDC39-201ENST00000442201 CRATP43155 626 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 NUBP1P53384 320 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 SIM1P81133 766 aaPredicted RBP7.59□□□□□ -1.19
CCDC39-201ENST00000442201 VAC14Q08AM6 782 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 NFATC3Q12968 1075 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 FADDQ13158 208 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 KCNAB1Q14722 419 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 VMACQ2NL98 169 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 MTX3Q5HYI7 312 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.59□□□□□ -1.19
CCDC39-201ENST00000442201 TCEAL6Q6IPX3 200 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 CCDC116Q8IYX3 515 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 D2HGDHQ8N465 521 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 OR4K14Q8NGD5 310 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 OR5T3Q8NGG3 340 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 PSMA8Q8TAA3 256 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 CANT1Q8WVQ1 401 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 TCEAL3Q969E4 200 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 DUS3LQ96G46 650 aaKnown RBP7.59□□□□□ -1.19
CCDC39-201ENST00000442201 TMEM80Q96HE8 168 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 C10orf90Q96M02 699 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 WDR12Q9GZL7 423 aaKnown RBP7.59□□□□□ -1.19
CCDC39-201ENST00000442201 SEMA3GQ9NS98 782 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 PNPLA3Q9NST1 481 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 ENPP5Q9UJA9 477 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 ATXN7L1Q9ULK2 861 aaPredicted RBP7.59□□□□□ -1.19
CCDC39-201ENST00000442201 MYRFQ9Y2G1 1151 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 DNAH14Q0VDD8 3507 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 PI4KAP42356 2102 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 NSA2O95478 260 aaKnown RBP7.59□□□□□ -1.19
CCDC39-201ENST00000442201 RPLP0P05388 317 aaKnown RBP7.59□□□□□ -1.19
CCDC39-201ENST00000442201 ZNF883P0CG24 379 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 C8orf89P0DMQ9 161 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 UMPSP11172 480 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 PRKAR1BP31321 381 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 TALDO1P37837 337 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 ESRRGP62508 458 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 POU6F2P78424 691 aaPredicted RBP7.59□□□□□ -1.19
CCDC39-201ENST00000442201 CCL7P80098 99 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 SHC2P98077 582 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 OCA2Q04671 838 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 FAM214AQ32MH5 1076 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 PROX2Q3B8N5 592 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 GPR135Q8IZ08 494 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 CA13Q8N1Q1 262 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 SLC22A8Q8TCC7 542 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 FAM162AQ96A26 154 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 CSF3RQ99062 836 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 DPYSL5Q9BPU6 564 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 DPH2Q9BQC3 489 aaPredicted RBP7.59□□□□□ -1.19
CCDC39-201ENST00000442201 SPRTNQ9H040 489 aaPredicted RBP7.59□□□□□ -1.19
CCDC39-201ENST00000442201 LRRN3Q9H3W5 708 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 SYNDIG1Q9H7V2 258 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 SIRT3Q9NTG7 399 aaPredicted RBP7.59□□□□□ -1.19
CCDC39-201ENST00000442201 SLC39A1Q9NY26 324 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 NPAP1Q9NZP6 1156 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 RAPGEFL1Q9UHV5 662 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.59□□□□□ -1.19
CCDC39-201ENST00000442201 AURKCQ9UQB9 309 aa7.59□□□□□ -1.19
CCDC39-201ENST00000442201 MDC1Q14676 2089 aaKnown RBP7.59□□□□□ -1.2
CCDC39-201ENST00000442201 A0A1W2PQM1 296 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 FITM1A5D6W6 292 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 TMEM150CB9EJG8 249 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 CASC3O15234 703 aaKnown RBP7.58□□□□□ -1.2
CCDC39-201ENST00000442201 CHST10O43529 356 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 FOXS1O43638 330 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 GRK6P43250 576 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 CCT3P49368 545 aaKnown RBP7.58□□□□□ -1.2
CCDC39-201ENST00000442201 XKP51811 444 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 NKX2-5P52952 324 aaPredicted RBP7.58□□□□□ -1.2
CCDC39-201ENST00000442201 MVDP53602 400 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 RAB38P57729 211 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 GPR85P60893 370 aa7.58□□□□□ -1.2
CCDC39-201ENST00000442201 IFITM3Q01628 133 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms