RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 PRRC2CQ9Y520 2896 aaKnown RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 PHF3Q92576 2039 aaKnown RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 A0A0G2JMM0 328 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 A0A1W2PPB8 328 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 GNG14A0A1W2PPG7 69 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 A0A1W2PRS3 328 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 FAM221AA4D161 298 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 FRG2CA6NGY1 282 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 LRRC14BA6NHZ5 514 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 OR6C70A6NIJ9 312 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 KIR3DP1A8MWS1 328 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 MANBAO00462 879 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 CASKO14936 926 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 ZNHIT1O43257 154 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 ERN1O75460 977 aaKnown RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 REM1O75628 298 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 GBAP04062 536 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 ABCB1P08183 1280 aaPredicted RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 CPN1P15169 458 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 GPX3P22352 226 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 IL12BP29460 328 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 UQCRC1P31930 480 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 CEACAM8P31997 349 aaPredicted RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 CCT5P48643 541 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 TRPC1P48995 793 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 FBXW4P57775 412 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 TFF3Q07654 80 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 FGFBP1Q14512 234 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 ZNHIT3Q15649 155 aaPredicted RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 ZNF678Q5SXM1 525 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 VASNQ6EMK4 673 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 RTL6Q6ICC9 239 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 ANGPTL8Q6UXH0 198 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 DGAT2L6Q6ZPD8 337 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 NCCRP1Q6ZVX7 275 aaPredicted RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 ZNF675Q8TD23 568 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 DCAKDQ8WVC6 231 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 SREK1Q8WXA9 508 aaKnown RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 OMA1Q96E52 524 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 C16orf45Q96MC5 204 aaPredicted RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 TIMP4Q99727 224 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 OSBPL11Q9BXB4 747 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 POLDIP3Q9BY77 421 aaKnown RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 MRPL1Q9BYD6 325 aaKnown RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 PROK2Q9HC23 129 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 FANCFQ9NPI8 374 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 SIRT5Q9NXA8 310 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 TEX10Q9NXF1 929 aaPredicted RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 ZNF639Q9UID6 485 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 CES1P1Q9UKY3 287 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 EXO1Q9UQ84 846 aaKnown RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 FAM215AQ9Y5M1 114 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 LIPGQ9Y5X9 500 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 CSMD1Q96PZ7 3565 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 PRAMEF25A6NGN4 478 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 LRRC3CA6NJW4 275 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 A8MT66 165 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 HRKO00198 91 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 ZNF354AO60765 605 aaPredicted RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 PRKRAO75569 313 aaKnown RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 IFI6P09912 130 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 FEN1P39748 380 aaKnown RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 PNLIPRP2P54317 469 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 PRKAA2P54646 552 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 CDH13P55290 713 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 SORDQ00796 357 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 CRYZQ08257 329 aaKnown RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 LCP2Q13094 533 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 DAZAP2Q15038 168 aaPredicted RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 CDSNQ15517 529 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 BCL2A1Q16548 175 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 CCDC153Q494R4 210 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 ACSF3Q4G176 576 aaPredicted RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 CFAP157Q5JU67 520 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 OR2A2Q6IF42 318 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 PLCZ1Q86YW0 608 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 FAM9CQ8IZT9 166 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 C1orf52Q8N6N3 182 aaKnown RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 EIF1ADQ8N9N8 165 aaKnown RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 OR52R1Q8NGF1 315 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 OR14L1PQ8NHC6 308 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 GNRHR2Q96P88 292 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 SLC6A15Q9H2J7 730 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 PTGES2Q9H7Z7 377 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 ZBTB26Q9HCK0 441 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 RRAGDQ9NQL2 400 aaPredicted RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 ZNF358Q9NW07 568 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 MAT2BQ9NZL9 334 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 PSMC3IPQ9P2W1 217 aaPredicted RBP7.11□□□□□ -1.27
CD44-211ENST00000442151 SPRR3Q9UBC9 169 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 NDRG3Q9UGV2 375 aa7.11□□□□□ -1.27
CD44-211ENST00000442151 SLC35F4A4IF30 521 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 MBD3L4A6NDZ8 208 aaPredicted RBP7.1□□□□□ -1.27
CD44-211ENST00000442151 MBD3L3A6NE82 208 aaPredicted RBP7.1□□□□□ -1.27
CD44-211ENST00000442151 TUBAL3A6NHL2 446 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 MBD3L5A6NJ08 208 aaPredicted RBP7.1□□□□□ -1.27
CD44-211ENST00000442151 GNB5O14775 395 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 PCDH7O60245 1069 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 ICOSLGO75144 302 aa7.1□□□□□ -1.27
CD44-211ENST00000442151 GLRA3O75311 464 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms