RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 SEMA5BQ9P283 1151 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 HEY2Q9UBP5 337 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 EPHA6Q9UF33 1036 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 POMT2Q9UKY4 750 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 NPFFR2Q9Y5X5 522 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 ROS1P08922 2347 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 ZNF407Q9C0G0 2248 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 SCN2AQ99250 2005 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 A0A0J9YY10 115 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 TRBC2A0A5B9 178 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 DYTNA2CJ06 578 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 OR2A25A4D2G3 310 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 CCT8L1PA6NM43 557 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 TRPC5OSA6NMA1 111 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 C2orf74A8MZ97 194 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 C4orf51C9J302 202 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 NPIPB8E9PQR5 432 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 SLC28A1O00337 649 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 P2RX6O15547 441 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 KCNAB3O43448 404 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 KIF1CO43896 1103 aaKnown RBP4.45□□□□□ -1.7
PTPN4-206ENST00000441089 KDM1AO60341 852 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 CTSVO60911 334 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 FZD7O75084 574 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 PEX11AO75192 247 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 SH3BGRLO75368 114 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 ULK1O75385 1050 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 RASAL1O95294 804 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 KRT6AP02538 564 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 STATHP02808 62 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 KRT6BP04259 564 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 SERPINA6P08185 405 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 PCNAP12004 261 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 FOLR1P15328 257 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 ST6GAL1P15907 406 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 MAGP20916 626 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 AGXTP21549 392 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 PRPH2P23942 346 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 IL12AP29459 219 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 CMPK1P30085 196 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 FOLR3P41439 243 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 CAPZBP47756 277 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 ZFP36L2P47974 494 aaKnown RBP4.45□□□□□ -1.7
PTPN4-206ENST00000441089 GABRA4P48169 554 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 KRT6CP48668 564 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 CCR8P51685 355 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 DIO3P55073 304 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 RPS13P62277 151 aaKnown RBP4.45□□□□□ -1.7
PTPN4-206ENST00000441089 NKX6-1P78426 367 aaPredicted RBP4.45□□□□□ -1.7
PTPN4-206ENST00000441089 ABATP80404 500 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 TBL3Q12788 808 aaKnown RBP4.45□□□□□ -1.7
PTPN4-206ENST00000441089 CSTF3Q12996 717 aaKnown RBP4.45□□□□□ -1.7
PTPN4-206ENST00000441089 IFT88Q13099 833 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 MFAP5Q13361 173 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 DDX39BQ13838 428 aaKnown RBP4.45□□□□□ -1.7
PTPN4-206ENST00000441089 RBBP5Q15291 538 aaKnown RBP4.45□□□□□ -1.7
PTPN4-206ENST00000441089 GALNTL6Q49A17 601 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 RFTN2Q52LD8 501 aaPredicted RBP4.45□□□□□ -1.7
PTPN4-206ENST00000441089 KRTCAP3Q53RY4 240 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 SPDYAQ5MJ70 313 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 PRR31Q5SQ13 230 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 C6orf136Q5SQH8 315 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 TMTC4Q5T4D3 741 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 FAM69BQ5VUD6 431 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 IGFL4Q6B9Z1 124 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 NXNQ6DKJ4 435 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 IRGCQ6NXR0 463 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 FBXO42Q6P3S6 717 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 KLHL35Q6PF15 583 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 BHLHB9Q6PI77 547 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 CD300LDQ6UXZ3 194 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 FAM92BQ6ZTR7 304 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 NCCRP1Q6ZVX7 275 aaPredicted RBP4.45□□□□□ -1.7
PTPN4-206ENST00000441089 VN1R4Q7Z5H5 301 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 MTDHQ86UE4 582 aaKnown RBP4.45□□□□□ -1.7
PTPN4-206ENST00000441089 OOSP2Q86WS3 158 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 KIRREL3Q8IZU9 778 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 AFAP1L2Q8N4X5 818 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 CPSF7Q8N684 471 aaKnown RBP4.45□□□□□ -1.7
PTPN4-206ENST00000441089 CREB3L4Q8TEY5 395 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 THAP3Q8WTV1 239 aaPredicted RBP4.45□□□□□ -1.7
PTPN4-206ENST00000441089 CCT6BQ92526 530 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 TUBGCP3Q96CW5 907 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 ERP27Q96DN0 273 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 C11orf24Q96F05 449 aaPredicted RBP4.45□□□□□ -1.7
PTPN4-206ENST00000441089 VPS50Q96JG6 964 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 FCRL1Q96LA6 429 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 RILPQ96NA2 401 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 LMF1Q96S06 567 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 MTERF1Q99551 399 aaKnown RBP4.45□□□□□ -1.7
PTPN4-206ENST00000441089 MAP3K3Q99759 626 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 MACROD1Q9BQ69 325 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 AIF1LQ9BQI0 150 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 DPH7Q9BTV6 452 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 C1orf50Q9BV19 199 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 SARGQ9BW04 601 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 CCDC106Q9BWC9 280 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 ZNF717Q9BY31 904 aaPredicted RBP4.45□□□□□ -1.7
PTPN4-206ENST00000441089 LHPPQ9H008 270 aa4.45□□□□□ -1.7
PTPN4-206ENST00000441089 PCBD2Q9H0N5 130 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms