RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ATP13A3Q9H7F0 1226 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 NOL11Q9H8H0 719 aaKnown RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 POLR1BQ9H9Y6 1135 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 IL1RL2Q9HB29 575 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 IL26Q9NPH9 171 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 CCDC177Q9NQR7 707 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 SDR39U1Q9NRG7 319 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 SIRT3Q9NTG7 399 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 C20orf141Q9NUB4 165 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 AIG1Q9NVV5 245 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 CMTM6Q9NX76 183 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 ABCD2Q9UBJ2 740 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 PEMTQ9UBM1 199 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 SUN2Q9UH99 717 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 CRLS1Q9UJA2 301 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 RIMS3Q9UJD0 308 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 LEF1Q9UJU2 399 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 INTS6Q9UL03 887 aaKnown RBP3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 BTRCQ9Y297 605 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 PPIL1Q9Y3C6 166 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 ANGPTL3Q9Y5C1 460 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 PTGDR2Q9Y5Y4 395 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 MYO16Q9Y6X6 1858 aa3.26□□□□□ -1.89
HMGB3P11-201ENST00000440127 C15orf38-AP3S2A0A0A6YYH1 394 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 A0A0U1RQS6 177 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 A0A1W2PPC1 479 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 TCRBV3S1A0A5B6 114 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 KANSL1LA0AUZ9 987 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 A6NNC1 897 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 A8MX80 341 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 CDRT15L2A8MXV6 281 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 MCIDASD6RGH6 385 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 TAF4O00268 1085 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 SLC28A1O00337 649 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 E2F3O00716 465 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 NME4O00746 187 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 GAPDHSO14556 408 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 OR7A17O14581 309 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 TAPBPO15533 448 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 RNASEH1O60930 286 aaKnown RBP3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 EEDO75530 441 aaKnown RBP3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF821O75541 412 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 POP4O95707 220 aaKnown RBP3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 GUCA1CO95843 209 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 OTCP00480 354 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 CAPN1P07384 714 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 FAM58BPP0C7Q3 252 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 OR56A5P0C7T3 313 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 UMPSP11172 480 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 SRCP12931 536 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 HSD17B1P14061 328 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 CSF2RAP15509 400 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF8P17098 575 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 GJA1P17302 382 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 PTPN2P17706 415 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 GABRB1P18505 474 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 UGT1A6P19224 532 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 IL10P22301 178 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 UGT1A1P22309 533 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 UGT1A4P22310 534 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 PAX7P23759 505 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 UGT1A3P35503 534 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 UGT1A5P35504 534 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 NSG1P42857 185 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 POLR2JP52435 117 aaKnown RBP3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 DIO3P55073 304 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 POLR2LP62875 67 aaKnown RBP3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 ERVK-8P63133 956 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 ECT2LQ008S8 904 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 LTBQ06643 244 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 RALGDSQ12967 914 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 MAD2L1Q13257 205 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 NFATC2Q13469 925 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 GPR18Q14330 331 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 DMC1Q14565 340 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 SMU1Q2TAY7 513 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 C18orf21Q32NC0 220 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 TTLL9Q3SXZ7 439 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 ATP6AP1LQ52LC2 224 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 CDKL4Q5MAI5 379 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 GPRC6AQ5T6X5 926 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 GARNL3Q5VVW2 1013 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZDHHC20Q5W0Z9 365 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 FAM219BQ5XKK7 198 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF324BQ6AW86 544 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 LCN8Q6JVE9 175 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 HMBOX1Q6NT76 420 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 C22orf39Q6P5X5 142 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 TTC23LQ6PF05 361 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 IL27RAQ6UWB1 636 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 SCIMPQ6UWF3 145 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 UGT2A3Q6UWM9 527 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 SBSNQ6UWP8 590 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 MACC1Q6ZN28 852 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 Q6ZSR9 355 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 TPRG1Q6ZUI0 275 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 SLC46A3Q7Z3Q1 461 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 GALNTL5Q7Z4T8 443 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 GOLGA7Q7Z5G4 137 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 ARPINQ7Z6K5 226 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms