RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 SAMD14Q8IZD0 417 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 CBR4Q8N4T8 237 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 COL26A1Q96A83 441 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 MMABQ96EY8 250 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SMIM10Q96HG1 83 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 HSH2DQ96JZ2 352 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ZNF597Q96LX8 424 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 AMDHD1Q96NU7 426 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 OSBPL11Q9BXB4 747 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 EPS8L2Q9H6S3 715 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 LYRM4Q9HD34 91 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SIRT3Q9NTG7 399 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ZCCHC3Q9NUD5 404 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 HCN3Q9P1Z3 774 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 GPN3Q9UHW5 284 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 PCDHGA6Q9Y5G7 932 aa13.61□□□□□ -0.23
TNFRSF1A-204ENST00000440083 CDC14CA4D256 554 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ZNF891A8MT65 544 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 MYO1GB0I1T2 1018 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SOCS2O14508 198 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 PGRMC2O15173 223 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 DNAJB6O75190 326 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 RDH16O75452 317 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 E2F6O75461 281 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 KLF7O75840 302 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 RASAL1O95294 804 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 FABP3P05413 133 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 AQP1P29972 269 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 MPIP34949 423 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 CCT3P49368 545 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 MVDP53602 400 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 RPS15P62841 145 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 OLR1P78380 273 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 MRPS35P82673 323 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ELOAQ14241 798 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ERV3-1Q14264 604 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 NKG7Q16617 165 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 NDUFA9Q16795 377 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 CYBRD1Q53TN4 286 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 MRPL14Q6P1L8 145 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 TNFAIP8L2Q6P589 184 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 OVCH1Q7RTY7 1134 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 C6orf120Q7Z4R8 191 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ZC3H7AQ8IWR0 971 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SVOPLQ8N434 492 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 OR5T3Q8NGG3 340 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 OR56A1Q8NGH5 318 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 PSMA8Q8TAA3 256 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 LZICQ8WZA0 190 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 PCSK5Q92824 1860 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 UCN3Q969E3 161 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 MAL2Q969L2 176 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 TPD52L3Q96J77 140 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 YIPF2Q9BWQ6 316 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 TRIM4Q9C037 500 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 PIEZO2Q9H5I5 2752 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ANKHQ9HCJ1 492 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ZNF304Q9HCX3 659 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 A4GALTQ9NPC4 353 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 PRDM9Q9NQV7 894 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 THUMPD1Q9NXG2 353 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 KCND3Q9UK17 655 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 TCFL5Q9UL49 500 aa13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 PTRH2Q9Y3E5 179 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-204ENST00000440083 MAGEA13PA6NCF6 341 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 PDLIM1O00151 329 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 DENRO43583 198 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 PDE9AO76083 593 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 ONECUT2O95948 504 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 UMODP07911 640 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 PPP2R1BP30154 601 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 FEN1P39748 380 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 MAGEA8P43361 318 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 LIM2P55344 173 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 PRR5P85299 388 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 CDC20Q12834 499 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 DSG2Q14126 1118 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 PDK3Q15120 406 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 C6orf52Q5T4I8 152 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 GALNT10Q86SR1 603 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 PATL1Q86TB9 770 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 TMBIM1Q969X1 311 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 MAGED4Q96JG8 741 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SLC29A1Q99808 456 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 MESP1Q9BRJ9 268 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 GPR87Q9BY21 358 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 RBCK1Q9BYM8 510 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SOX17Q9H6I2 414 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 C3orf14Q9HBI5 128 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 GPATCH2Q9NW75 528 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 P2RX2Q9UBL9 471 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 TRPC4Q9UBN4 977 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 NAALAD2Q9Y3Q0 740 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 SLC22A7Q9Y694 548 aa13.59□□□□□ -0.23
TNFRSF1A-204ENST00000440083 EI24O14681 340 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 EMC8O43402 210 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 JRKO75564 520 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 PRSS23O95084 383 aa13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 NSA2O95478 260 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1A-204ENST00000440083 FHP07954 510 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms