RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ASMTP46597 345 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 WDR4P57081 412 aaKnown RBP21.71■■□□□ 1.07
VARS-217ENST00000440048 MAGOHP61326 146 aaKnown RBP21.71■■□□□ 1.07
VARS-217ENST00000440048 PDE7AQ13946 482 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 C6orf136Q5SQH8 315 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 BICRALQ6AI39 1079 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 TMEM107Q6UX40 140 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 FAM109AQ8N4B1 249 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 CIDECQ96AQ7 238 aaPredicted RBP21.71■■□□□ 1.07
VARS-217ENST00000440048 PPCDCQ96CD2 204 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 TLCD1Q96CP7 247 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 VSTM2LQ96N03 204 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 BTBD9Q96Q07 612 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 SECISBP2Q96T21 854 aaKnown RBP21.71■■□□□ 1.07
VARS-217ENST00000440048 SORT1Q99523 831 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 DOHHQ9BU89 302 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 FOLH1BQ9HBA9 442 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 TAS2R9Q9NYW1 312 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 BOKQ9UMX3 212 aaPredicted RBP21.71■■□□□ 1.07
VARS-217ENST00000440048 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.71■■□□□ 1.07
VARS-217ENST00000440048 RAP2CQ9Y3L5 183 aa21.71■■□□□ 1.07
VARS-217ENST00000440048 FREM3P0C091 2139 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 A1L4Q6 167 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 ANKRD33BA6NCL7 494 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 CYSRT1A8MQ03 144 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 PLOD2O00469 737 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 PDPK1O15530 556 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 ZG16O60844 167 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 CT45A8P0DMV1 189 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 CT45A9P0DMV2 189 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 MAGEA5P43359 124 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 CORO7P57737 925 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 PLCXD2Q0VAA5 305 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 STX3Q13277 289 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 CT45A2Q5DJT8 189 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 TBCELQ5QJ74 424 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 ZNF551Q7Z340 670 aaPredicted RBP21.7■■□□□ 1.06
VARS-217ENST00000440048 SLC34A3Q8N130 599 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 LIX1Q8N485 282 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 TUBGCP3Q96CW5 907 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 ELP4Q96EB1 424 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 C1orf50Q9BV19 199 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 ZFP64Q9NPA5 681 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 SH3BP4Q9P0V3 963 aa21.7■■□□□ 1.06
VARS-217ENST00000440048 C19orf53Q9UNZ5 99 aaPredicted RBP21.7■■□□□ 1.06
VARS-217ENST00000440048 ITPR2Q14571 2701 aa21.69■■□□□ 1.06
VARS-217ENST00000440048 TEX15Q9BXT5 2789 aa21.69■■□□□ 1.06
VARS-217ENST00000440048 LRRC3CA6NJW4 275 aa21.69■■□□□ 1.06
VARS-217ENST00000440048 COQ9O75208 318 aa21.69■■□□□ 1.06
VARS-217ENST00000440048 ERN1O75460 977 aaKnown RBP21.69■■□□□ 1.06
VARS-217ENST00000440048 SNUPNO95149 360 aaKnown RBP21.69■■□□□ 1.06
VARS-217ENST00000440048 PTGS2P35354 604 aa21.69■■□□□ 1.06
VARS-217ENST00000440048 RPP38P78345 283 aaKnown RBP21.69■■□□□ 1.06
VARS-217ENST00000440048 PDCD2Q16342 344 aaPredicted RBP21.69■■□□□ 1.06
VARS-217ENST00000440048 DESI1Q6ICB0 168 aa21.69■■□□□ 1.06
VARS-217ENST00000440048 PAOXQ6QHF9 649 aa21.69■■□□□ 1.06
VARS-217ENST00000440048 NPSR1Q6W5P4 371 aa21.69■■□□□ 1.06
VARS-217ENST00000440048 NUP54Q7Z3B4 507 aa21.69■■□□□ 1.06
VARS-217ENST00000440048 FNDC5Q8NAU1 212 aa21.69■■□□□ 1.06
VARS-217ENST00000440048 MGARPQ8TDB4 240 aa21.69■■□□□ 1.06
VARS-217ENST00000440048 HGDQ93099 445 aa21.69■■□□□ 1.06
VARS-217ENST00000440048 JSRP1Q96MG2 331 aaPredicted RBP21.69■■□□□ 1.06
VARS-217ENST00000440048 ANGPTL4Q9BY76 406 aa21.69■■□□□ 1.06
VARS-217ENST00000440048 SUCOQ9UBS9 1254 aaKnown RBP21.69■■□□□ 1.06
VARS-217ENST00000440048 LIPGQ9Y5X9 500 aa21.69■■□□□ 1.06
VARS-217ENST00000440048 CRYBG3Q68DQ2 2970 aa21.69■■□□□ 1.06
VARS-217ENST00000440048 UPK1AO00322 258 aa21.68■■□□□ 1.06
VARS-217ENST00000440048 TRIM3O75382 744 aaPredicted RBP21.68■■□□□ 1.06
VARS-217ENST00000440048 IGHG3P01860 377 aa21.68■■□□□ 1.06
VARS-217ENST00000440048 CELA3AP09093 270 aa21.68■■□□□ 1.06
VARS-217ENST00000440048 RFPL3SP0C7P2 107 aa21.68■■□□□ 1.06
VARS-217ENST00000440048 CASP3P42574 277 aa21.68■■□□□ 1.06
VARS-217ENST00000440048 RPL14P50914 215 aaKnown RBP21.68■■□□□ 1.06
VARS-217ENST00000440048 SLC18A1P54219 525 aa21.68■■□□□ 1.06
VARS-217ENST00000440048 BST1Q10588 318 aa21.68■■□□□ 1.06
VARS-217ENST00000440048 HSPB3Q12988 150 aa21.68■■□□□ 1.06
VARS-217ENST00000440048 IL23RQ5VWK5 629 aa21.68■■□□□ 1.06
VARS-217ENST00000440048 ARHGAP11AQ6P4F7 1023 aa21.68■■□□□ 1.06
VARS-217ENST00000440048 MAMDC2Q7Z304 686 aaPredicted RBP21.68■■□□□ 1.06
VARS-217ENST00000440048 DOLPP1Q86YN1 238 aa21.68■■□□□ 1.06
VARS-217ENST00000440048 OR2L13Q8N349 312 aa21.68■■□□□ 1.06
VARS-217ENST00000440048 TMBIM1Q969X1 311 aa21.68■■□□□ 1.06
VARS-217ENST00000440048 MTERF3Q96E29 417 aa21.68■■□□□ 1.06
VARS-217ENST00000440048 CCDC120Q96HB5 630 aa21.68■■□□□ 1.06
VARS-217ENST00000440048 RILPQ96NA2 401 aa21.68■■□□□ 1.06
VARS-217ENST00000440048 ZNF703Q9H7S9 590 aaPredicted RBP21.68■■□□□ 1.06
VARS-217ENST00000440048 DDX18Q9NVP1 670 aaKnown RBP21.68■■□□□ 1.06
VARS-217ENST00000440048 ATP6V1HQ9UI12 483 aa21.68■■□□□ 1.06
VARS-217ENST00000440048 HAO1Q9UJM8 370 aa21.68■■□□□ 1.06
VARS-217ENST00000440048 PRRG2O14669 202 aa21.67■■□□□ 1.06
VARS-217ENST00000440048 UGT2B11O75310 529 aa21.67■■□□□ 1.06
VARS-217ENST00000440048 PSMG1O95456 288 aa21.67■■□□□ 1.06
VARS-217ENST00000440048 CLDN1O95832 211 aa21.67■■□□□ 1.06
VARS-217ENST00000440048 PRPS2P11908 318 aa21.67■■□□□ 1.06
VARS-217ENST00000440048 HPCAL1P37235 193 aa21.67■■□□□ 1.06
VARS-217ENST00000440048 FRKP42685 505 aaPredicted RBP21.67■■□□□ 1.06
VARS-217ENST00000440048 ZNF155Q12901 538 aaPredicted RBP21.67■■□□□ 1.06
VARS-217ENST00000440048 PTGR1Q14914 329 aa21.67■■□□□ 1.06
VARS-217ENST00000440048 SLC10A1Q14973 349 aa21.67■■□□□ 1.06
VARS-217ENST00000440048 TMEM198Q66K66 360 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms