RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 PHF12Q96QT6 1004 aa22.05■■□□□ 1.12
CPNE1-217ENST00000439669 REEP4Q9H6H4 257 aa22.05■■□□□ 1.12
CPNE1-217ENST00000439669 LDAHQ9H6V9 325 aa22.05■■□□□ 1.12
CPNE1-217ENST00000439669 EXO5Q9H790 373 aa22.05■■□□□ 1.12
CPNE1-217ENST00000439669 ZNF703Q9H7S9 590 aaPredicted RBP22.05■■□□□ 1.12
CPNE1-217ENST00000439669 METTL7AQ9H8H3 244 aa22.05■■□□□ 1.12
CPNE1-217ENST00000439669 FOLH1BQ9HBA9 442 aa22.05■■□□□ 1.12
CPNE1-217ENST00000439669 TAS2R9Q9NYW1 312 aa22.05■■□□□ 1.12
CPNE1-217ENST00000439669 B4GALT7Q9UBV7 327 aa22.05■■□□□ 1.12
CPNE1-217ENST00000439669 BAIAP2L1Q9UHR4 511 aa22.05■■□□□ 1.12
CPNE1-217ENST00000439669 GPR55Q9Y2T6 319 aaPredicted RBP22.05■■□□□ 1.12
CPNE1-217ENST00000439669 ANKRD33BA6NCL7 494 aa22.04■■□□□ 1.12
CPNE1-217ENST00000439669 TMEM114B3SHH9 223 aa22.04■■□□□ 1.12
CPNE1-217ENST00000439669 PDPK1O15530 556 aa22.04■■□□□ 1.12
CPNE1-217ENST00000439669 ITM2AO43736 263 aa22.04■■□□□ 1.12
CPNE1-217ENST00000439669 PEX11AO75192 247 aa22.04■■□□□ 1.12
CPNE1-217ENST00000439669 SLITRK5O94991 958 aa22.04■■□□□ 1.12
CPNE1-217ENST00000439669 MAPK1P28482 360 aa22.04■■□□□ 1.12
CPNE1-217ENST00000439669 ASMTP46597 345 aa22.04■■□□□ 1.12
CPNE1-217ENST00000439669 CORO7P57737 925 aa22.04■■□□□ 1.12
CPNE1-217ENST00000439669 ATP6AP1LQ52LC2 224 aa22.04■■□□□ 1.12
CPNE1-217ENST00000439669 CES4AQ5XG92 561 aa22.04■■□□□ 1.12
CPNE1-217ENST00000439669 TRILQ7L0X0 811 aa22.04■■□□□ 1.12
CPNE1-217ENST00000439669 MRGPRGQ86SM5 289 aa22.04■■□□□ 1.12
CPNE1-217ENST00000439669 EID3Q8N140 333 aa22.04■■□□□ 1.12
CPNE1-217ENST00000439669 ANKRD42Q8N9B4 389 aa22.04■■□□□ 1.12
CPNE1-217ENST00000439669 TMBIM1Q969X1 311 aa22.04■■□□□ 1.12
CPNE1-217ENST00000439669 VSTM2LQ96N03 204 aa22.04■■□□□ 1.12
CPNE1-217ENST00000439669 BTBD9Q96Q07 612 aa22.04■■□□□ 1.12
CPNE1-217ENST00000439669 PAIP2Q9BPZ3 127 aaKnown RBP22.04■■□□□ 1.12
CPNE1-217ENST00000439669 DDX18Q9NVP1 670 aaKnown RBP22.04■■□□□ 1.12
CPNE1-217ENST00000439669 SH3BP4Q9P0V3 963 aa22.04■■□□□ 1.12
CPNE1-217ENST00000439669 EXPH5Q8NEV8 1989 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 A0A087WV62 115 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 CYSRT1A8MQ03 144 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 NPIPA2E9PIF3 369 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 NPIPA3F8WFD2 350 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 TO15178 435 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 REM1O75628 298 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 SNX4O95219 450 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 IGHG3P01860 377 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 RFPL3SP0C7P2 107 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 DHRS4L1P0CG22 281 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 BCKDHAP12694 445 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 COL8A1P27658 744 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 ABCE1P61221 599 aaKnown RBP22.03■■□□□ 1.12
CPNE1-217ENST00000439669 HSPB3Q12988 150 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 MPP2Q14168 576 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 DESI1Q6ICB0 168 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 NCCRP1Q6ZVX7 275 aaPredicted RBP22.03■■□□□ 1.12
CPNE1-217ENST00000439669 NUP54Q7Z3B4 507 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 ZNF808Q8N4W9 903 aaPredicted RBP22.03■■□□□ 1.12
CPNE1-217ENST00000439669 HGDQ93099 445 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 CIDECQ96AQ7 238 aaPredicted RBP22.03■■□□□ 1.12
CPNE1-217ENST00000439669 C3orf30Q96M34 536 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 ANGPTL4Q9BY76 406 aa22.03■■□□□ 1.12
CPNE1-217ENST00000439669 NINQ8N4C6 2090 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 ZNF407Q9C0G0 2248 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 E9PLN8 166 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 UGT2B11O75310 529 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 TRIM3O75382 744 aaPredicted RBP22.02■■□□□ 1.12
CPNE1-217ENST00000439669 BGNP21810 368 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 GDF1P27539 372 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 KRT20P35900 424 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 CASP3P42574 277 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 MAN2A2P49641 1150 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 SMSP52788 366 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 ADORA2A-AS1P86434 159 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 ZNF385BQ569K4 471 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 BEND6Q5SZJ8 279 aaPredicted RBP22.02■■□□□ 1.12
CPNE1-217ENST00000439669 NPSR1Q6W5P4 371 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 ZNF551Q7Z340 670 aaPredicted RBP22.02■■□□□ 1.12
CPNE1-217ENST00000439669 PACS2Q86VP3 889 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 SLC44A2Q8IWA5 706 aaPredicted RBP22.02■■□□□ 1.12
CPNE1-217ENST00000439669 FNDC5Q8NAU1 212 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 ZFP28Q8NHY6 868 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 TUBGCP3Q96CW5 907 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 ZNF764Q96H86 408 aaPredicted RBP22.02■■□□□ 1.12
CPNE1-217ENST00000439669 NODALQ96S42 347 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 VKORC1Q9BQB6 163 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 C1orf50Q9BV19 199 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 ZNF395Q9H8N7 513 aaPredicted RBP22.02■■□□□ 1.12
CPNE1-217ENST00000439669 C19orf53Q9UNZ5 99 aaPredicted RBP22.02■■□□□ 1.12
CPNE1-217ENST00000439669 OR10H1Q9Y4A9 318 aa22.02■■□□□ 1.12
CPNE1-217ENST00000439669 TRGV5A0A0B4J1U4 118 aa22.01■■□□□ 1.11
CPNE1-217ENST00000439669 PLOD2O00469 737 aa22.01■■□□□ 1.11
CPNE1-217ENST00000439669 CT45A8P0DMV1 189 aa22.01■■□□□ 1.11
CPNE1-217ENST00000439669 CT45A9P0DMV2 189 aa22.01■■□□□ 1.11
CPNE1-217ENST00000439669 GPC1P35052 558 aa22.01■■□□□ 1.11
CPNE1-217ENST00000439669 HPCAL1P37235 193 aa22.01■■□□□ 1.11
CPNE1-217ENST00000439669 PDCD2Q16342 344 aaPredicted RBP22.01■■□□□ 1.11
CPNE1-217ENST00000439669 CT45A2Q5DJT8 189 aa22.01■■□□□ 1.11
CPNE1-217ENST00000439669 HHATQ5VTY9 493 aa22.01■■□□□ 1.11
CPNE1-217ENST00000439669 LIX1Q8N485 282 aa22.01■■□□□ 1.11
CPNE1-217ENST00000439669 ZNF781Q8N8C0 355 aa22.01■■□□□ 1.11
CPNE1-217ENST00000439669 ELP4Q96EB1 424 aa22.01■■□□□ 1.11
CPNE1-217ENST00000439669 COL21A1Q96P44 957 aa22.01■■□□□ 1.11
CPNE1-217ENST00000439669 OSBPL11Q9BXB4 747 aa22.01■■□□□ 1.11
CPNE1-217ENST00000439669 TP63Q9H3D4 680 aaPredicted RBP22.01■■□□□ 1.11
CPNE1-217ENST00000439669 QPCTLQ9NXS2 382 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms