RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 SRSF2Q01130 221 aaKnown RBP10.08□□□□□ -0.8
CSTF3-203ENST00000438862 RPS6KA2Q15349 733 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 TMEM249Q2WGJ8 235 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 KRT71Q3SY84 523 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 CEP85LQ5SZL2 805 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 TIGD3Q6B0B8 471 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 ADAM5Q6NVV9 412 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 TRIM40Q6P9F5 258 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 NXPE4Q6UWF7 544 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 PLXDC2Q6UX71 529 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 C12orf54Q6X4T0 127 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 C22orf34Q6ZV56 151 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 MYO1HQ8N1T3 1032 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 NKAPQ8N5F7 415 aaKnown RBP10.08□□□□□ -0.8
CSTF3-203ENST00000438862 CNEP1R1Q8N9A8 125 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 OR2L5Q8NG80 312 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 OR1J4Q8NGS1 313 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 OR2W6PQ8NHA6 318 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 SPPL2AQ8TCT8 520 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 MZB1Q8WU39 189 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 AKAP1Q92667 903 aaKnown RBP eCLIP10.08□□□□□ -0.8
CSTF3-203ENST00000438862 CTHRC1Q96CG8 243 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 RBM18Q96H35 190 aaKnown RBP10.08□□□□□ -0.8
CSTF3-203ENST00000438862 FBXL20Q96IG2 436 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 TNFRSF13CQ96RJ3 184 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 CSF3RQ99062 836 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 TMEM204Q9BSN7 226 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 G6PC3Q9BUM1 346 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 TRIM54Q9BYV2 358 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 ESRP2Q9H6T0 727 aaKnown RBP10.08□□□□□ -0.8
CSTF3-203ENST00000438862 BARX1Q9HBU1 254 aaPredicted RBP10.08□□□□□ -0.8
CSTF3-203ENST00000438862 ARL15Q9NXU5 204 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 WWOXQ9NZC7 414 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 SLC17A6Q9P2U8 582 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 DLGAP4Q9Y2H0 992 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 MTO1Q9Y2Z2 717 aaKnown RBP10.08□□□□□ -0.8
CSTF3-203ENST00000438862 ACTL7BQ9Y614 415 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 KCNE2Q9Y6J6 123 aa10.08□□□□□ -0.8
CSTF3-203ENST00000438862 YLPM1P49750 1951 aaKnown RBP10.08□□□□□ -0.8
CSTF3-203ENST00000438862 DYSFO75923 2080 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 TLDC2A0PJX2 215 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 TRIM49D1C9J1S8 452 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 RGS16O15492 202 aaPredicted RBP10.07□□□□□ -0.8
CSTF3-203ENST00000438862 H2AFYO75367 372 aaKnown RBP10.07□□□□□ -0.8
CSTF3-203ENST00000438862 PLAUP00749 431 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 ALDOAP04075 364 aaKnown RBP10.07□□□□□ -0.8
CSTF3-203ENST00000438862 KRT15P19012 456 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 PTPN6P29350 595 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 TYK2P29597 1187 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 HNRNPH1P31943 449 aaKnown RBP10.07□□□□□ -0.8
CSTF3-203ENST00000438862 CASP3P42574 277 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 STT3AP46977 705 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 TMED10P49755 219 aaKnown RBP10.07□□□□□ -0.8
CSTF3-203ENST00000438862 PLA2G16P53816 162 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 CASP9P55211 416 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 TAS2R39P59534 338 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 VLDLRP98155 873 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 PCDH1Q08174 1060 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 FUT7Q11130 342 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 RBM20Q5T481 1227 aaKnown RBP10.07□□□□□ -0.8
CSTF3-203ENST00000438862 MROH9Q5TGP6 573 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 ANKRD34AQ69YU3 496 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 LINC00114Q6XXX2 140 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 P4HA3Q7Z4N8 544 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 YRDCQ86U90 279 aaKnown RBP10.07□□□□□ -0.8
CSTF3-203ENST00000438862 TRIM42Q8IWZ5 723 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 SGMS2Q8NHU3 365 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 EPS8L3Q8TE67 593 aaKnown RBP10.07□□□□□ -0.8
CSTF3-203ENST00000438862 EDARADDQ8WWZ3 215 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 FBXL8Q96CD0 374 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 PLPPR2Q96GM1 343 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 TSNARE1Q96NA8 513 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 DGAT2Q96PD7 388 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 GAL3ST4Q96RP7 486 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 OPN3Q9H1Y3 402 aaPredicted RBP10.07□□□□□ -0.8
CSTF3-203ENST00000438862 COPS7BQ9H9Q2 264 aaPredicted RBP10.07□□□□□ -0.8
CSTF3-203ENST00000438862 TMBIM4Q9HC24 238 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 LYRM4Q9HD34 91 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 ZNF446Q9NWS9 450 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 TEX10Q9NXF1 929 aaPredicted RBP10.07□□□□□ -0.8
CSTF3-203ENST00000438862 TRMT6Q9UJA5 497 aaKnown RBP10.07□□□□□ -0.8
CSTF3-203ENST00000438862 RNF112Q9ULX5 631 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 ACOT9Q9Y305 439 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 SPACA6W5XKT8 324 aa10.07□□□□□ -0.8
CSTF3-203ENST00000438862 TGP01266 2768 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 OR6C76A6NM76 312 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 PLOD2O00469 737 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 EMC8O43402 210 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 HCRTR2O43614 444 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 CLEC3AO75596 197 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 WISP3O95389 354 aaPredicted RBP10.06□□□□□ -0.8
CSTF3-203ENST00000438862 TGM6O95932 706 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 CGAP01215 116 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 IGHV4-39P01824 125 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 C2P06681 752 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 THBDP07204 575 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 GSTA1P08263 222 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 DANCRP0C864 163 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 CD8BP10966 210 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 ZNF37AP17032 561 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms