RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 ISM1B1AKI9 464 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 HAT1O14929 419 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 TPST2O60704 377 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 ZNF217O75362 1048 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 IGFBP1P08833 259 aaPredicted RBP13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 CHRM5P08912 532 aaPredicted RBP13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 FRKP42685 505 aaPredicted RBP13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 NCBP2P52298 156 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 STARD6P59095 220 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 EIF2B5Q13144 721 aaKnown RBP13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 TCTN3Q6NUS6 607 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 DEPDC4Q8N2C3 294 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 SLC6A18Q96N87 628 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 NEDD4LQ96PU5 975 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 ORAI3Q9BRQ5 295 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 CHCHD6Q9BRQ6 235 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 ROGDIQ9GZN7 287 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 OR51I1Q9H343 314 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 PLSCR3Q9NRY6 295 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 ZCCHC3Q9NUD5 404 aaKnown RBP13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 OR6C2Q9NZP2 312 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 WNT16Q9UBV4 365 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 SPTY2D1-AS1A0A0U1RR47 76 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 A0A1W2PS29 197 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 CTDSP2O14595 271 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 IDH3BO43837 385 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 MRPS14O60783 128 aaKnown RBP13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 PTHP01270 115 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 CELA2BP08218 269 aaPredicted RBP13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 HSMCR30P0CW71 290 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 C8orf89P0DMQ9 161 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 CNR2P34972 360 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 CDC42P60953 191 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 FZD2Q14332 565 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 GPR19Q15760 415 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 TBCEQ15813 527 aaPredicted RBP13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 PRRT3Q5FWE3 981 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 ZNF770Q6IQ21 691 aaPredicted RBP13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 COMTD1Q86VU5 262 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 PATE1Q8WXA2 126 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 AMDHD1Q96NU7 426 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 IL4I1Q96RQ9 567 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 SDHCQ99643 169 aaPredicted RBP13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 SRMSQ9H3Y6 488 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 SYNPO2LQ9H987 977 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 PRDM6Q9NQX0 595 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 SEMA3GQ9NS98 782 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 KCND3Q9UK17 655 aa13.06□□□□□ -0.32
PTCHD3-201ENST00000438700 LINC00854A0A1B0GVQ3 168 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 BTN3A3O00478 584 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 OR10H3O60404 316 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 TBX19O60806 448 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 CLEC3AO75596 197 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 CYP7B1O75881 506 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 ADORA3P0DMS8 318 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 ABATP80404 500 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 DOC2BQ14184 412 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 NDUFA5Q16718 116 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 ATAD3CQ5T2N8 411 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 B3GNT7Q8NFL0 401 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 OR6F1Q8NGZ6 308 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 ZNF675Q8TD23 568 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 GPBAR1Q8TDU6 330 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 SHDQ96IW2 340 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 SLC35G5Q96KT7 338 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 KCNS3Q9BQ31 491 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 PLCXD1Q9NUJ7 323 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 DDX28Q9NUL7 540 aaKnown RBP13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 EHD3Q9NZN3 535 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 FBXW2Q9UKT8 454 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 WBP11Q9Y2W2 641 aaKnown RBP13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 PCDHGB6Q9Y5F9 930 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 M0R3H8 397 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 TAF4O00268 1085 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 RGS13O14921 159 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 PGRMC2O15173 223 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 NR2F1P10589 423 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 ELAVL4P26378 380 aaKnown RBP13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 CMPK1P30085 196 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 CRISP1P54107 249 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 SLAMF1Q13291 335 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 IRF3Q14653 427 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 FRMPD2BQ6IN97 320 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 PTCHD4Q6ZW05 846 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 SFTPA2Q8IWL1 248 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 TRIM48Q8IWZ4 208 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 BBS4Q96RK4 519 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 SLC35C2Q9NQQ7 365 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 GPR27Q9NS67 375 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 FKBP14Q9NWM8 211 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 FTSJ1Q9UET6 329 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 TMCC3Q9ULS5 477 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 ATG4BQ9Y4P1 393 aa13.05□□□□□ -0.32
PTCHD3-201ENST00000438700 A8MVJ9 347 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 NME6O75414 186 aaPredicted RBP13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 PTTG1O95997 202 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 EIF2S1P05198 315 aaKnown RBP13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 ADRA2AP08913 450 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 RAB8AP61006 207 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms