RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 ATP6AP2O75787 350 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 LRATO95237 230 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 ABCB1P08183 1280 aaPredicted RBP14.94□□□□□ -0.02
SMPD4-207ENST00000435455 PRPS2P11908 318 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 RPL14P50914 215 aaKnown RBP14.94□□□□□ -0.02
SMPD4-207ENST00000435455 MAD2L1Q13257 205 aaPredicted RBP14.94□□□□□ -0.02
SMPD4-207ENST00000435455 PDE7AQ13946 482 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 SMU1Q2TAY7 513 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 NUP54Q7Z3B4 507 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 LIX1Q8N485 282 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 FAM109AQ8N4B1 249 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 ZNF781Q8N8C0 355 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 FNDC5Q8NAU1 212 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 OR52N2Q8NGI0 321 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 SPPL2AQ8TCT8 520 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 OMA1Q96E52 524 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 ZBED6CLQ96FA7 236 aaPredicted RBP14.94□□□□□ -0.02
SMPD4-207ENST00000435455 ZNF597Q96LX8 424 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 VSTM2LQ96N03 204 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 DOHHQ9BU89 302 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 ANKRA2Q9H9E1 313 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 FOLH1BQ9HBA9 442 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 SH3BP4Q9P0V3 963 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 GIMAP2Q9UG22 337 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 HAO1Q9UJM8 370 aa14.94□□□□□ -0.02
SMPD4-207ENST00000435455 C19orf53Q9UNZ5 99 aaPredicted RBP14.94□□□□□ -0.02
SMPD4-207ENST00000435455 CCL21O00585 134 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 PRRG2O14669 202 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 ABCB7O75027 752 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 MC3RP41968 323 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 WDR4P57081 412 aaKnown RBP14.93□□□□□ -0.02
SMPD4-207ENST00000435455 HSF1Q00613 529 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 ZNF155Q12901 538 aaPredicted RBP14.93□□□□□ -0.02
SMPD4-207ENST00000435455 PDCD2Q16342 344 aaPredicted RBP14.93□□□□□ -0.02
SMPD4-207ENST00000435455 C3AR1Q16581 482 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 AGBL2Q5U5Z8 902 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 TMEM198Q66K66 360 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 ARHGAP11AQ6P4F7 1023 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 TMEM81Q6P7N7 255 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 TMEM107Q6UX40 140 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 CHERPQ8IWX8 916 aaKnown RBP14.93□□□□□ -0.02
SMPD4-207ENST00000435455 OR2L13Q8N349 312 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 TMEM251Q8N6I4 163 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 ELP4Q96EB1 424 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 SORT1Q99523 831 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 C1orf50Q9BV19 199 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 ANGPTL4Q9BY76 406 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 C20orf27Q9GZN8 174 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 DEFB127Q9H1M4 99 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 ZNF395Q9H8N7 513 aaPredicted RBP14.93□□□□□ -0.02
SMPD4-207ENST00000435455 PROK2Q9HC23 129 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 ACSS1Q9NUB1 689 aaPredicted RBP14.93□□□□□ -0.02
SMPD4-207ENST00000435455 DDX18Q9NVP1 670 aaKnown RBP14.93□□□□□ -0.02
SMPD4-207ENST00000435455 QPCTLQ9NXS2 382 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 ATP6V1HQ9UI12 483 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 SH3BGRL2Q9UJC5 107 aa14.93□□□□□ -0.02
SMPD4-207ENST00000435455 A0A1B0GTH9 108 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 TTC36A6NLP5 189 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 SCAMP2O15127 329 aaKnown RBP14.92□□□□□ -0.02
SMPD4-207ENST00000435455 TRIM3O75382 744 aaPredicted RBP14.92□□□□□ -0.02
SMPD4-207ENST00000435455 SNX4O95219 450 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 IGHG3P01860 377 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 RNF224P0DH78 156 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 CT45A8P0DMV1 189 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 CT45A9P0DMV2 189 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 GP1BBP13224 206 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 GPC1P35052 558 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 PTGS2P35354 604 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 KRT20P35900 424 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 CASP3P42574 277 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 FRKP42685 505 aaPredicted RBP14.92□□□□□ -0.02
SMPD4-207ENST00000435455 MAGEA5P43359 124 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 MANFP55145 182 aaKnown RBP14.92□□□□□ -0.02
SMPD4-207ENST00000435455 BST1Q10588 318 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 SLC10A1Q14973 349 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 ZNHIT3Q15649 155 aaPredicted RBP14.92□□□□□ -0.02
SMPD4-207ENST00000435455 ZNF385BQ569K4 471 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 CT45A2Q5DJT8 189 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 IL23RQ5VWK5 629 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 ANKRD26P1Q6NSI1 321 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 ZNF551Q7Z340 670 aaPredicted RBP14.92□□□□□ -0.02
SMPD4-207ENST00000435455 PACS2Q86VP3 889 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 SLC44A2Q8IWA5 706 aaPredicted RBP14.92□□□□□ -0.02
SMPD4-207ENST00000435455 TRIM42Q8IWZ5 723 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 EID3Q8N140 333 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 RAB3IL1Q8TBN0 382 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 MGARPQ8TDB4 240 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 RILPQ96NA2 401 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 METTL7AQ9H8H3 244 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 ARGLU1Q9NWB6 273 aaPredicted RBP14.92□□□□□ -0.02
SMPD4-207ENST00000435455 B4GALT7Q9UBV7 327 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 TINAGQ9UJW2 476 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 EIF3LQ9Y262 564 aaKnown RBP14.92□□□□□ -0.02
SMPD4-207ENST00000435455 OR10H1Q9Y4A9 318 aa14.92□□□□□ -0.02
SMPD4-207ENST00000435455 OR6C70A6NIJ9 312 aa14.91□□□□□ -0.02
SMPD4-207ENST00000435455 LRRC3CA6NJW4 275 aa14.91□□□□□ -0.02
SMPD4-207ENST00000435455 UPK1AO00322 258 aa14.91□□□□□ -0.02
SMPD4-207ENST00000435455 SUSD5O60279 629 aa14.91□□□□□ -0.02
SMPD4-207ENST00000435455 ZG16O60844 167 aa14.91□□□□□ -0.02
SMPD4-207ENST00000435455 REM1O75628 298 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms