RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 CKMT1AP12532 417 aa17.46■□□□□ 0.39
CLK1-205ENST00000434813 MAT2AP31153 395 aaKnown RBP17.46■□□□□ 0.39
CLK1-205ENST00000434813 GIPRP48546 466 aa17.46■□□□□ 0.39
CLK1-205ENST00000434813 GINS1Q14691 196 aa17.46■□□□□ 0.39
CLK1-205ENST00000434813 SYT14P1Q58G82 188 aa17.46■□□□□ 0.39
CLK1-205ENST00000434813 STEAP3Q658P3 488 aa17.46■□□□□ 0.39
CLK1-205ENST00000434813 AMIGO1Q86WK6 493 aa17.46■□□□□ 0.39
CLK1-205ENST00000434813 PAQR7Q86WK9 346 aa17.46■□□□□ 0.39
CLK1-205ENST00000434813 NRROSQ86YC3 692 aa17.46■□□□□ 0.39
CLK1-205ENST00000434813 CLIP4Q8N3C7 705 aa17.46■□□□□ 0.39
CLK1-205ENST00000434813 NUP43Q8NFH3 380 aa17.46■□□□□ 0.39
CLK1-205ENST00000434813 OR9A2Q8NGT5 310 aa17.46■□□□□ 0.39
CLK1-205ENST00000434813 GAL3ST3Q96A11 431 aa17.46■□□□□ 0.39
CLK1-205ENST00000434813 GABRG3Q99928 467 aa17.46■□□□□ 0.39
CLK1-205ENST00000434813 NDUFB11Q9NX14 153 aa17.46■□□□□ 0.39
CLK1-205ENST00000434813 CALML5Q9NZT1 146 aa17.46■□□□□ 0.39
CLK1-205ENST00000434813 SEC14L4Q9UDX3 406 aa17.46■□□□□ 0.39
CLK1-205ENST00000434813 DIMT1Q9UNQ2 313 aaKnown RBP17.46■□□□□ 0.39
CLK1-205ENST00000434813 A0A075B6Q4 140 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 ISM1B1AKI9 464 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 SCAMP1O15126 338 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 ACADMP11310 421 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 NTSR1P30989 418 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 SOX3P41225 446 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 KIAA1024LP59773 190 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 LSM11P83369 360 aaKnown RBP eCLIP17.45■□□□□ 0.385e-9■■□□□ 11.5
CLK1-205ENST00000434813 EFNB1P98172 346 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 MLLT11Q13015 90 aaPredicted RBP17.45■□□□□ 0.38
CLK1-205ENST00000434813 TMEM196Q5HYL7 178 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 ZNF311Q5JNZ3 666 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 TJAP1Q5JTD0 557 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 BCDIN3DQ7Z5W3 292 aaKnown RBP17.45■□□□□ 0.38
CLK1-205ENST00000434813 ZBTB8BQ8NAP8 495 aaPredicted RBP17.45■□□□□ 0.38
CLK1-205ENST00000434813 JPH3Q8WXH2 748 aaPredicted RBP17.45■□□□□ 0.38
CLK1-205ENST00000434813 NECTIN4Q96NY8 510 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 QRSL1Q9H0R6 528 aaKnown RBP17.45■□□□□ 0.38
CLK1-205ENST00000434813 SLC6A17Q9H1V8 727 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 FBRSQ9HAH7 460 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 KLF15Q9UIH9 416 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 ZNF229Q9UJW7 825 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 MDC1Q14676 2089 aaKnown RBP17.45■□□□□ 0.38
CLK1-205ENST00000434813 PNMA8CA0A1B0GUJ8 204 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 TLX2O43763 284 aaPredicted RBP17.45■□□□□ 0.38
CLK1-205ENST00000434813 ALPPP05187 535 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 HBQ1P09105 142 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 NR2F6P10588 404 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 NDUFS1P28331 727 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 SMSP52788 366 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 C1DQ13901 141 aaKnown RBP17.45■□□□□ 0.38
CLK1-205ENST00000434813 VN1R4Q7Z5H5 301 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 LCN9Q8WX39 176 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 QPCTLQ9NXS2 382 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 TBC1D29Q9UFV1 150 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 ZNF780BQ9Y6R6 833 aa17.45■□□□□ 0.38
CLK1-205ENST00000434813 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 A0A087WUU8 490 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 TBC1D3DA0A087WVF3 549 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 TBC1D3IA0A087WXS9 549 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 TBC1D3EA0A087X179 549 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 TBC1D3KA0A087X1G2 549 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 TBC1D3FA6NER0 549 aaPredicted RBP17.44■□□□□ 0.38
CLK1-205ENST00000434813 TBC1D3LB9A6J9 549 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 MYL12BO14950 172 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 ZSCAN9O15535 394 aaPredicted RBP17.44■□□□□ 0.38
CLK1-205ENST00000434813 RAB36O95755 333 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 HOXC4P09017 264 aaPredicted RBP17.44■□□□□ 0.38
CLK1-205ENST00000434813 TBC1D3HP0C7X1 549 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 TAS2R41P59536 307 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 RPS15AP62244 130 aaKnown RBP17.44■□□□□ 0.38
CLK1-205ENST00000434813 PPP2CBP62714 309 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 PPP2CAP67775 309 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 CHRNEQ04844 493 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 TBC1D3GQ6DHY5 549 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 TBC1D3CQ6IPX1 549 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 ACSM5Q6NUN0 579 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 CCDC190Q86UF4 302 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 KIF18BQ86Y91 864 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 TBC1D3Q8IZP1 549 aaPredicted RBP17.44■□□□□ 0.38
CLK1-205ENST00000434813 CACTIN-AS1Q8N1I8 211 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 ASB12Q8WXK4 309 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 GIMAP5Q96F15 307 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 MSLNLQ96KJ4 702 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 LRR1Q96L50 414 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 ZNF582Q96NG8 517 aaPredicted RBP17.44■□□□□ 0.38
CLK1-205ENST00000434813 ANKRD19PQ9H560 264 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 EQTNQ9NQ60 294 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 CTPS2Q9NRF8 586 aa17.44■□□□□ 0.38
CLK1-205ENST00000434813 TESQ9UGI8 421 aaKnown RBP17.44■□□□□ 0.38
CLK1-205ENST00000434813 SLC31A1O15431 190 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 PTTG1O95997 202 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 PSMA1P25786 263 aaKnown RBP17.43■□□□□ 0.38
CLK1-205ENST00000434813 LTBRP36941 435 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 IFNGR2P38484 337 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 BTN3A2P78410 334 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 SLC13A2Q13183 592 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 CBX3Q13185 183 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 MRGPREQ86SM8 312 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 SMRP1Q8NCR6 262 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 OR4E2Q8NGC2 313 aa17.43■□□□□ 0.38
CLK1-205ENST00000434813 OR52I1Q8NGK6 324 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms