RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 SDC2P34741 201 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 GAS1P54826 345 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 WNT4P56705 351 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 TAS2R41P59536 307 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 RPS25P62851 125 aaKnown RBP11.1□□□□□ -0.63
CD44-209ENST00000433892 DAB2P98082 770 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 HYAL2Q12891 473 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 GPR50Q13585 617 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 KRT33BQ14525 404 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 KLHL22Q53GT1 634 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 FAM131AQ6UXB0 335 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 PRICKLE2Q7Z3G6 844 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 LAPTM4BQ86VI4 370 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 LSRQ86X29 649 aaPredicted RBP11.1□□□□□ -0.63
CD44-209ENST00000433892 UBQLNLQ8IYU4 475 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 LINC00471Q8N535 108 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 SYT14Q8NB59 555 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 OR8D4Q8NGM9 314 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 SETD6Q8TBK2 473 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 CHAC2Q8WUX2 184 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 MS4A6EQ96DS6 147 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 ZNF486Q96H40 463 aaPredicted RBP11.1□□□□□ -0.63
CD44-209ENST00000433892 WDFY2Q96P53 400 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 TEX101Q9BY14 249 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 SAP130Q9H0E3 1048 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 MIXL1Q9H2W2 232 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 TOR4AQ9NXH8 423 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 SERGEFQ9UGK8 458 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 GPR55Q9Y2T6 319 aaPredicted RBP11.1□□□□□ -0.63
CD44-209ENST00000433892 DNMT3AQ9Y6K1 912 aaPredicted RBP11.1□□□□□ -0.63
CD44-209ENST00000433892 A0A0C4DFX4 3053 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 A0A0G2JPF8 293 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 PRR23AA6NEV1 266 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 CPSF4LA6NMK7 179 aaKnown RBP11.1□□□□□ -0.63
CD44-209ENST00000433892 HNRNPCL2B2RXH8 293 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 HNRNPCL3B7ZW38 293 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 AIFM1O95831 613 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 KRT8P05787 483 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 HNRNPCL4P0DMR1 293 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 NR2F6P10588 404 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 ACP2P11117 423 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 CERS1P27544 350 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 RAB8AP61006 207 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 HOXC5Q00444 222 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 IFITM2Q01629 132 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 BNC1Q01954 994 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 CHRNEQ04844 493 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 TMEM35AQ53FP2 167 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 ZNF311Q5JNZ3 666 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 C3orf38Q5JPI3 329 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 AGBL4Q5VU57 503 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 KIAA1211LQ6NV74 962 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 SLC27A4Q6P1M0 643 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 ABHD17CQ6PCB6 329 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 ZNF517Q6ZMY9 492 aaPredicted RBP11.1□□□□□ -0.63
CD44-209ENST00000433892 VRK2Q86Y07 508 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 OR6F1Q8NGZ6 308 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 TEX47Q8TBZ9 253 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 TMEM163Q8TC26 289 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 ASB16Q96NS5 453 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 SLC6A20Q9NP91 592 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 MRPS30Q9NP92 439 aaKnown RBP11.1□□□□□ -0.63
CD44-209ENST00000433892 PRDM7Q9NQW5 492 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 PLEKHB1Q9UF11 243 aaPredicted RBP11.1□□□□□ -0.63
CD44-209ENST00000433892 PCDHGB2Q9Y5G2 931 aa11.1□□□□□ -0.63
CD44-209ENST00000433892 SLC35F4A4IF30 521 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 FAM170BA6NMN3 283 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 TFECO14948 347 aaPredicted RBP11.09□□□□□ -0.63
CD44-209ENST00000433892 CASC3O15234 703 aaKnown RBP11.09□□□□□ -0.63
CD44-209ENST00000433892 PRODHO43272 600 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 CH25HO95992 272 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 IL1AP01583 271 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 FHP07954 510 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 GSTM3P21266 225 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 ATP5A1P25705 553 aaKnown RBP11.09□□□□□ -0.63
CD44-209ENST00000433892 CD79BP40259 229 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 MC3RP41968 323 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 MTNR1AP48039 350 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 RAB40BQ12829 278 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 IRF4Q15306 451 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 ZIC1Q15915 447 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 CRTC2Q53ET0 693 aaPredicted RBP11.09□□□□□ -0.63
CD44-209ENST00000433892 ZNF544Q6NX49 715 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 BHLHB9Q6PI77 547 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 TMEM64Q6YI46 380 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 GATAD2AQ86YP4 633 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 FBXL6Q8N531 539 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 CAMKK1Q8N5S9 505 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 ZFP41Q8N8Y5 198 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 TTLQ8NG68 377 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 FAM46AQ96IP4 442 aaKnown RBP11.09□□□□□ -0.63
CD44-209ENST00000433892 KCTD7Q96MP8 289 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 OR7D2Q96RA2 312 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 PINK1Q9BXM7 581 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 TP63Q9H3D4 680 aaPredicted RBP11.09□□□□□ -0.63
CD44-209ENST00000433892 SYNPO2LQ9H987 977 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 SEMA4GQ9NTN9 838 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 MOSPD1Q9UJG1 213 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 ENTPD4Q9Y227 616 aa11.09□□□□□ -0.63
CD44-209ENST00000433892 FABP12A6NFH5 140 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms