RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 PRAMEF12O95522 483 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 PGK2P07205 417 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 ZNF853P0CG23 659 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 TPBGLP0DKB5 382 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 PAICSP22234 425 aaKnown RBP2.31□□□□□ -2.04
PTPN4-205ENST00000433888 ACP1P24666 158 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 CYP2F1P24903 491 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 GDF1P27539 372 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 DLSTP36957 453 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 MAGEA4P43358 317 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 OR3A3P47888 321 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 IFNAR2P48551 515 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 ARFIP1P53367 373 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 GEMP55040 296 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 SLC3A1Q07837 685 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 ELP6Q0PNE2 266 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 CNTN1Q12860 1018 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 OVGP1Q12889 678 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 MSLNQ13421 630 aaPredicted RBP2.31□□□□□ -2.04
PTPN4-205ENST00000433888 ABRAXAS2Q15018 415 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 ZKSCAN8Q15776 578 aaPredicted RBP2.31□□□□□ -2.04
PTPN4-205ENST00000433888 STXBP2Q15833 593 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 ANKDD1AQ495B1 522 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 GPAT3Q53EU6 434 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 CELF3Q5SZQ8 465 aaKnown RBP2.31□□□□□ -2.04
PTPN4-205ENST00000433888 DCAF12Q5T6F0 453 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 LYPLAL1Q5VWZ2 237 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 LIPJQ5W064 366 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 DLEU7Q6UYE1 221 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 RBM43Q6ZSC3 357 aaKnown RBP2.31□□□□□ -2.04
PTPN4-205ENST00000433888 UNC5CLQ8IV45 518 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 CCDC197Q8NCU1 140 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 RAB7BQ96AH8 199 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 DTNBP1Q96EV8 351 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 EEF2KMTQ96G04 330 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 ZNF274Q96GC6 653 aaPredicted RBP2.31□□□□□ -2.04
PTPN4-205ENST00000433888 VPS39Q96JC1 886 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 KCNK16Q96T55 309 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 COQ7Q99807 217 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 CXXC4Q9H2H0 198 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 ROPN1Q9HAT0 212 aaPredicted RBP2.31□□□□□ -2.04
PTPN4-205ENST00000433888 GPR173Q9NS66 373 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 DDX28Q9NUL7 540 aaKnown RBP2.31□□□□□ -2.04
PTPN4-205ENST00000433888 ANKMY1Q9P2S6 941 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 KCNN3Q9UGI6 736 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 NARFQ9UHQ1 456 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 CCPG1Q9ULG6 757 aa2.31□□□□□ -2.04
PTPN4-205ENST00000433888 TRIM64CA6NLI5 447 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 NPIPA3F8WFD2 350 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 M0R296 226 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 P2RX6O15547 441 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 LRRTM2O43300 516 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 MBD3O95983 291 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 CA3P07451 260 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 KRT13P13646 458 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 GNSP15586 552 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 ZNF18P17022 549 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 IL10P22301 178 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 PAX7P23759 505 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 NSFP46459 744 aaKnown RBP2.3□□□□□ -2.04
PTPN4-205ENST00000433888 CCL11P51671 97 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 RPP38P78345 283 aaKnown RBP2.3□□□□□ -2.04
PTPN4-205ENST00000433888 CXCL6P80162 114 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 NUCB2P80303 420 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 PAX2Q02962 417 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 GABPB1Q06547 395 aaPredicted RBP2.3□□□□□ -2.04
PTPN4-205ENST00000433888 CRMP1Q14194 572 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 GAMTQ14353 236 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 HEPACAMQ14CZ8 416 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 SPHARQ15513 63 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 GRAMD2AQ8IUY3 354 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 FBXO16Q8IX29 292 aaPredicted RBP2.3□□□□□ -2.04
PTPN4-205ENST00000433888 SLC22A18ASQ8N1D0 253 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 LEMD2Q8NC56 503 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 OR56B1Q8NGI3 324 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 OR52B4Q8NGK2 314 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 OR4L1Q8NH43 312 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 MCHR2Q969V1 340 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 SLC35C1Q96A29 364 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 TMEM186Q96B77 213 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 TRIM44Q96DX7 344 aaPredicted RBP2.3□□□□□ -2.04
PTPN4-205ENST00000433888 CFAP36Q96G28 342 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 DEFB118Q96PH6 123 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 ERP44Q9BS26 406 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 UBQLN3Q9H347 655 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 TMEM231Q9H6L2 316 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 NMUR1Q9HB89 426 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 CNOT2Q9NZN8 540 aaKnown RBP2.3□□□□□ -2.04
PTPN4-205ENST00000433888 MRTO4Q9UKD2 239 aaKnown RBP2.3□□□□□ -2.04
PTPN4-205ENST00000433888 ABCG2Q9UNQ0 655 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 ENTPD4Q9Y227 616 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 ABCC4O15439 1325 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 KIF7Q2M1P5 1343 aa2.3□□□□□ -2.04
PTPN4-205ENST00000433888 NPC1L1Q9UHC9 1359 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 IGKV6-21A0A0C4DH24 114 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 A0A0U1RQV5 110 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 FAM149AA5PLN7 773 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 CCT8L1PA6NM43 557 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 H0YCG3 227 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 NDC80O14777 642 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms