RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 A0A087WYN8 130 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 TRBV5-4A0A0C4DH59 114 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 A8MUI8 341 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 ALOX15BO15296 676 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 GMFGO60234 142 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 GOT2P00505 430 aaKnown RBP4.93□□□□□ -1.62
USP54-206ENST00000433394 CSF2P04141 144 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 ZCCHC18P0CG32 403 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 MT3P25713 68 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 UCP1P25874 307 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 HTR2AP28223 471 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 PTGFRP43088 359 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 HTR5AP47898 357 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 MRPS6P82932 125 aaKnown RBP4.93□□□□□ -1.62
USP54-206ENST00000433394 ACY1Q03154 408 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 EXOSC2Q13868 293 aaKnown RBP4.93□□□□□ -1.62
USP54-206ENST00000433394 TRIP10Q15642 601 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 CCDC57Q2TAC2 916 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 KRTAP24-1Q3LI83 254 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 DCAF4L1Q3SXM0 396 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 CEP85LQ5SZL2 805 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 TAF3Q5VWG9 929 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 GALNT17Q6IS24 598 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 SCYL2Q6P3W7 929 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 NIPAL3Q6P499 406 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 ATRAIDQ6UW56 229 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 METTL7BQ6UX53 244 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 FAM43BQ6ZT52 329 aaPredicted RBP4.93□□□□□ -1.62
USP54-206ENST00000433394 STKLD1Q8NE28 680 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 DENND6BQ8NEG7 585 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 NABP1Q96AH0 204 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 BIRC7Q96CA5 298 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 TRIM44Q96DX7 344 aaPredicted RBP4.93□□□□□ -1.62
USP54-206ENST00000433394 MOCOSQ96EN8 888 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 NAP1L5Q96NT1 182 aaPredicted RBP4.93□□□□□ -1.62
USP54-206ENST00000433394 IWS1Q96ST2 819 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 LRRC61Q9BV99 259 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 NFKBIZQ9BYH8 718 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 TUBB1Q9H4B7 451 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 DUS2Q9NX74 493 aaKnown RBP4.93□□□□□ -1.62
USP54-206ENST00000433394 GPR83Q9NYM4 423 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 CUX2O14529 1486 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 FANCD2Q9BXW9 1451 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 CEP164Q9UPV0 1460 aa4.93□□□□□ -1.62
USP54-206ENST00000433394 MEX3AA1L020 520 aaKnown RBP4.92□□□□□ -1.62
USP54-206ENST00000433394 C11orf98E9PRG8 122 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 H7C423 109 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 RANBP6O60518 1105 aaKnown RBP4.92□□□□□ -1.62
USP54-206ENST00000433394 SNAP91O60641 907 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 FRAT2O75474 233 aaPredicted RBP4.92□□□□□ -1.62
USP54-206ENST00000433394 APBB3O95704 486 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 IGSF6O95976 241 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 IGHG1P01857 330 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 KRT8P05787 483 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 H2AFXP16104 143 aaPredicted RBP4.92□□□□□ -1.62
USP54-206ENST00000433394 PSMA5P28066 241 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 MAT2AP31153 395 aaKnown RBP4.92□□□□□ -1.62
USP54-206ENST00000433394 RFC2P35250 354 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 ADRA1AP35348 466 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 SOX6P35712 828 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 IFNAR2P48551 515 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 EMDP50402 254 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 FUT7Q11130 342 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 ZNF699Q32M78 642 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 ANKRD55Q3KP44 614 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 ZC2HC1BQ5TFG8 222 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 ZNF613Q6PF04 617 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 LRRC70Q7Z2Q7 622 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 CEACAM19Q7Z692 300 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 CBWD2Q8IUF1 395 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 LRRC49Q8IUZ0 686 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 EFCAB13Q8IY85 973 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 FADS6Q8N9I5 356 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 GMCL1P1Q8NEA9 526 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 MCHR2Q969V1 340 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 SLC25A36Q96CQ1 311 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 ZNF597Q96LX8 424 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 FAM173AQ9BQD7 235 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 TSPY26PQ9H489 355 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 IL1RL2Q9HB29 575 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 FAM114A2Q9NRY5 505 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 DCAF13Q9NV06 445 aaKnown RBP4.92□□□□□ -1.62
USP54-206ENST00000433394 KLHDC2Q9Y2U9 406 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 GRIN2DO15399 1336 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 KIF16BQ96L93 1317 aa4.92□□□□□ -1.62
USP54-206ENST00000433394 A0A0U1RQV5 110 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 A0A1B0GUL7 405 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 TEX48A0A1B0GUV7 120 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 H3BMH7 237 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 SOCS3O14543 225 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 MCF2LO15068 1137 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 RHOBTB1O94844 696 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 OR4F21O95013 312 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 CYP11B1P15538 503 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 LMO2P25791 158 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 SAA4P35542 130 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 VCPP55072 806 aaKnown RBP4.91□□□□□ -1.62
USP54-206ENST00000433394 NAAAQ02083 359 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 ELP6Q0PNE2 266 aa4.91□□□□□ -1.62
USP54-206ENST00000433394 ZP4Q12836 540 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms