RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 ELL3Q9HB65 397 aaPredicted RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 IL1RAPL2Q9NP60 686 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 RPRD1BQ9NQG5 326 aaKnown RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 ABCC13Q9NSE7 274 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 SLCO1C1Q9NYB5 712 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 Q9UF83 564 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 GPR132Q9UNW8 380 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 CHTOPQ9Y3Y2 248 aaKnown RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 KLF18A0A0U1RQI7 1052 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 LRRD1A4D1F6 860 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 NCF1BA6NI72 391 aaPredicted RBP2.4□□□□□ -2.03
CLK1-204ENST00000432425 SRRM4A7MD48 611 aaKnown RBP2.4□□□□□ -2.03
CLK1-204ENST00000432425 RNF212BA8MTL3 300 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 NCF1CA8MVU1 366 aaPredicted RBP2.4□□□□□ -2.03
CLK1-204ENST00000432425 H0YHG0 523 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 IFIT3O14879 490 aaKnown RBP2.4□□□□□ -2.03
CLK1-204ENST00000432425 WDR46O15213 610 aaKnown RBP2.4□□□□□ -2.03
CLK1-204ENST00000432425 CSO75390 466 aaKnown RBP2.4□□□□□ -2.03
CLK1-204ENST00000432425 RAD51DO75771 328 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 AKAP3O75969 853 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 PRAMEF12O95522 483 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 ALPPP05187 535 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 FCGR3AP08637 254 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 GSTA2P09210 222 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 POLR2MP0CAP2 368 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 TPBGLP0DKB5 382 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 ALPPL2P10696 532 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 GHRP10912 638 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 EZRP15311 586 aaKnown RBP2.4□□□□□ -2.03
CLK1-204ENST00000432425 FOSL2P15408 326 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 HMGCLP35914 325 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 RGRP47804 291 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 SARNPP82979 210 aaKnown RBP2.4□□□□□ -2.03
CLK1-204ENST00000432425 ELP6Q0PNE2 266 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 RPS6KA1Q15418 735 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 GSG1Q2KHT4 349 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 C1orf185Q5T7R7 199 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 ZNF525Q8N782 197 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 ICA1LQ8NDH6 482 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 NEK11Q8NG66 645 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 OR52K1Q8NGK4 314 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 SLC13A3Q8WWT9 602 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 BCL2L2Q92843 193 aaPredicted RBP2.4□□□□□ -2.03
CLK1-204ENST00000432425 ESAMQ96AP7 390 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 C16orf58Q96GQ5 468 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 DHTKD1Q96HY7 919 aaPredicted RBP2.4□□□□□ -2.03
CLK1-204ENST00000432425 EPSTI1Q96J88 318 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 FAM111AQ96PZ2 611 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 MAPKAP1Q9BPZ7 522 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 DDX50Q9BQ39 737 aaKnown RBP2.4□□□□□ -2.03
CLK1-204ENST00000432425 ERP44Q9BS26 406 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 UTP14AQ9BVJ6 771 aaKnown RBP2.4□□□□□ -2.03
CLK1-204ENST00000432425 LRRC2Q9BYS8 371 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 DEFB126Q9BYW3 111 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 CCSER1Q9C0I3 900 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 SLC5A7Q9GZV3 580 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 CUEDC2Q9H467 287 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 ASB8Q9H765 288 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 GORASP2Q9H8Y8 452 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 MRPL17Q9NRX2 175 aaKnown RBP2.4□□□□□ -2.03
CLK1-204ENST00000432425 PLEK2Q9NYT0 353 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 SPATA7Q9P0W8 599 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 SPASTQ9UBP0 616 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 CLEC4EQ9ULY5 219 aa2.4□□□□□ -2.03
CLK1-204ENST00000432425 H0YCG3 227 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 TNFSF11O14788 317 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 PSMA7O14818 248 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 CETN3O15182 167 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 MAPK13O15264 365 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 ST8SIA3O43173 380 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 KIAA0513O60268 411 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 IDH1O75874 414 aaKnown RBP2.39□□□□□ -2.03
CLK1-204ENST00000432425 SLITRK3O94933 977 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 UROSP10746 265 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 MGMTP16455 207 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 FASP25445 335 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 CALML3P27482 149 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 CCR1P32246 355 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 RFC4P35249 363 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 MAGEA4P43358 317 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 CCNHP51946 323 aaPredicted RBP2.39□□□□□ -2.03
CLK1-204ENST00000432425 AP3M2P53677 418 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 UBE2HP62256 183 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 PLD1Q13393 1074 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 RIPK1Q13546 671 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 DOC2AQ14183 400 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 ACKR1Q16570 336 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 HADHQ16836 314 aaKnown RBP2.39□□□□□ -2.03
CLK1-204ENST00000432425 C14orf28Q4W4Y0 310 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 TOR1AIP1Q5JTV8 583 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 CGB2Q6NT52 195 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 ARMCX2Q7L311 632 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 HOOK3Q86VS8 718 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 ELMOD2Q8IZ81 293 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 ARL14Q8N4G2 192 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 GVQW1Q8N7I0 195 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 FAM184AQ8NB25 1140 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 NHLRC2Q8NBF2 726 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 ATAD1Q8NBU5 361 aa2.39□□□□□ -2.03
CLK1-204ENST00000432425 UXS1Q8NBZ7 420 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms