RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 TOR1AIP2Q8NFQ8 470 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 GPR32P1Q8NGA4 272 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 GNPDA2Q8TDQ7 276 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 FOXJ1Q92949 421 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 TP53INP1Q96A56 240 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 SLC25A46Q96AG3 418 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 SLC35G5Q96KT7 338 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 PRRC1Q96M27 445 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 OR2A14Q96R47 310 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 SDHCQ99643 169 aaPredicted RBP8.21□□□□□ -1.1
GABPB1-205ENST00000429662 KCNS3Q9BQ31 491 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 ROGDIQ9GZN7 287 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 SLC22A4Q9H015 551 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 OR52A5Q9H2C5 316 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 DDX31Q9H8H2 851 aaKnown RBP8.21□□□□□ -1.1
GABPB1-205ENST00000429662 TMEM165Q9HC07 324 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 FBXL12Q9NXK8 326 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 QPCTLQ9NXS2 382 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 CALML5Q9NZT1 146 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 ZMIZ1Q9ULJ6 1067 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 SNX7Q9UNH6 387 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 ASF1AQ9Y294 204 aa8.21□□□□□ -1.1
GABPB1-205ENST00000429662 MTCL1Q9Y4B5 1905 aaKnown RBP8.21□□□□□ -1.1
GABPB1-205ENST00000429662 CENPXA8MT69 81 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 FAM47E-STBD1D6RA91 191 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 ANHXE9PGG2 379 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 SYT5O00445 386 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 HMGN4O00479 90 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 RGS5O15539 181 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 PRODHO43272 600 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 IDH3BO43837 385 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 TRIM3O75382 744 aaPredicted RBP8.2□□□□□ -1.1
GABPB1-205ENST00000429662 MOSPD3O75425 235 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 CLEC3AO75596 197 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 POU2F2P09086 479 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 TSPAN19P0C672 248 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 NR2F1P10589 423 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 C6P13671 934 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 GALP22466 123 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 CFL1P23528 166 aaKnown RBP8.2□□□□□ -1.1
GABPB1-205ENST00000429662 NTSP30990 170 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 CCR2P41597 374 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 GIPRP48546 466 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 CASP9P55211 416 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 WNT4P56705 351 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 CDK5Q00535 292 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 GUCA2AQ02747 115 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 GPR50Q13585 617 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 TPBGQ13641 420 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 LARS2Q15031 903 aaKnown RBP8.2□□□□□ -1.1
GABPB1-205ENST00000429662 DHCR24Q15392 516 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 PRSS53Q2L4Q9 553 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 SOWAHCQ53LP3 525 aaPredicted RBP8.2□□□□□ -1.1
GABPB1-205ENST00000429662 DDI2Q5TDH0 399 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 TNFAIP8L2Q6P589 184 aaPredicted RBP8.2□□□□□ -1.1
GABPB1-205ENST00000429662 SLC36A4Q6YBV0 504 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 ZNF517Q6ZMY9 492 aaPredicted RBP8.2□□□□□ -1.1
GABPB1-205ENST00000429662 DEF8Q6ZN54 512 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 USP30Q70CQ3 517 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 ERN2Q76MJ5 926 aaKnown RBP8.2□□□□□ -1.1
GABPB1-205ENST00000429662 MRGPREQ86SM8 312 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 LRRTM4Q86VH4 590 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 PHC2Q8IXK0 858 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 CELF5Q8N6W0 485 aaKnown RBP8.2□□□□□ -1.1
GABPB1-205ENST00000429662 TCEANCQ8N8B7 351 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 KDF1Q8NAX2 398 aaPredicted RBP8.2□□□□□ -1.1
GABPB1-205ENST00000429662 OR56A1Q8NGH5 318 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 OR5K2Q8NHB8 316 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 SUN3Q8TAQ9 357 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 CXorf40AQ8TE69 158 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 ASB15Q8WXK1 588 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 TFGQ92734 400 aaPredicted RBP8.2□□□□□ -1.1
GABPB1-205ENST00000429662 RFKQ969G6 155 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 CHFRQ96EP1 664 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 KCTD7Q96MP8 289 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 SLC38A2Q96QD8 506 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 IL4I1Q96RQ9 567 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 NOTCH4Q99466 2003 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 RAB11FIP5Q9BXF6 653 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 PINK1Q9BXM7 581 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 ZNF717Q9BY31 904 aaPredicted RBP8.2□□□□□ -1.1
GABPB1-205ENST00000429662 SRRQ9GZT4 340 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 LINC00597Q9H2U6 94 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 SPNS1Q9H2V7 528 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 RNF167Q9H6Y7 350 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 SIRT3Q9NTG7 399 aaPredicted RBP8.2□□□□□ -1.1
GABPB1-205ENST00000429662 MED17Q9NVC6 651 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 NCDNQ9UBB6 729 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 RHCGQ9UBD6 479 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 TESQ9UGI8 421 aaKnown RBP8.2□□□□□ -1.1
GABPB1-205ENST00000429662 PHF11Q9UIL8 331 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 POU2F3Q9UKI9 436 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 CA14Q9ULX7 337 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 SH2B3Q9UQQ2 575 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 SNX11Q9Y5W9 270 aa8.2□□□□□ -1.1
GABPB1-205ENST00000429662 ADAMTS20P59510 1910 aa8.19□□□□□ -1.1
GABPB1-205ENST00000429662 HEPACAM2A8MVW5 462 aa8.19□□□□□ -1.1
GABPB1-205ENST00000429662 C1QTNF3-AMACRE9PGA6 284 aa8.19□□□□□ -1.1
GABPB1-205ENST00000429662 NDUFS4O43181 175 aa8.19□□□□□ -1.1
GABPB1-205ENST00000429662 CHST10O43529 356 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms