RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 PIGWQ7Z7B1 504 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 ZNF227Q86WZ6 799 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 SIMC1Q8NDZ2 872 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 MIPOL1Q8TD10 442 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 SCMH1Q96GD3 660 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 ITCHQ96J02 903 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 MARK4Q96L34 752 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 BBC3Q96PG8 261 aaPredicted RBP13.81□□□□□ -0.2
GARNL3-204ENST00000429629 GAL3ST4Q96RP7 486 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 STACQ99469 402 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 NXF5Q9H1B4 397 aaKnown RBP13.81□□□□□ -0.2
GARNL3-204ENST00000429629 EPN3Q9H201 632 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 CXorf36Q9H7Y0 433 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 SERHLQ9NQF3 203 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 DUSP22Q9NRW4 184 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 ZCCHC3Q9NUD5 404 aaKnown RBP13.81□□□□□ -0.2
GARNL3-204ENST00000429629 HPF1Q9NWY4 346 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 PLA2G3Q9NZ20 509 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 GMEB1Q9Y692 573 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 ZFYVE26Q68DK2 2539 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 TLN1Q9Y490 2541 aaKnown RBP13.81□□□□□ -0.2
GARNL3-204ENST00000429629 MED13Q9UHV7 2174 aa13.81□□□□□ -0.2
GARNL3-204ENST00000429629 A0A1W2PP18 115 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 ANKRD33BA6NCL7 494 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 DUXAA6NLW8 204 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 LCN1P31025 176 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 PTGER1P34995 402 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 MRPS22P82650 360 aaKnown RBP13.8□□□□□ -0.2
GARNL3-204ENST00000429629 OC90Q02509 493 aaPredicted RBP13.8□□□□□ -0.2
GARNL3-204ENST00000429629 ZNF169Q14929 603 aaPredicted RBP13.8□□□□□ -0.2
GARNL3-204ENST00000429629 OR1C1Q15619 314 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 NTRK2Q16620 822 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 ZNF468Q5VIY5 522 aaPredicted RBP13.8□□□□□ -0.2
GARNL3-204ENST00000429629 SLC6A19Q695T7 634 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 SLC25A25Q6KCM7 469 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 MFSD12Q6NUT3 480 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 RTL4Q6ZR62 310 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 NUP54Q7Z3B4 507 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 CLECL1Q8IZS7 167 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 SLC34A3Q8N130 599 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 TMEM178AQ8NBL3 297 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 OR4A15Q8NGL6 344 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 OR9I1Q8NGQ6 314 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 PAQR8Q8TEZ7 354 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 TMEM125Q96AQ2 219 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 SPACA9Q96E40 222 aaPredicted RBP13.8□□□□□ -0.2
GARNL3-204ENST00000429629 SPDL1Q96EA4 605 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 PANX1Q96RD7 426 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 ELAC2Q9BQ52 826 aaKnown RBP13.8□□□□□ -0.2
GARNL3-204ENST00000429629 ITPAQ9BY32 194 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 ACTRT3Q9BYD9 372 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.8□□□□□ -0.2
GARNL3-204ENST00000429629 LIN28AQ9H9Z2 209 aaKnown RBP13.8□□□□□ -0.2
GARNL3-204ENST00000429629 SH2D2AQ9NP31 389 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 TIMMDC1Q9NPL8 285 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 SAR1AQ9NR31 198 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 GPATCH2Q9NW75 528 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 CNIH4Q9P003 139 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 MRTO4Q9UKD2 239 aaKnown RBP13.8□□□□□ -0.2
GARNL3-204ENST00000429629 ADAM21Q9UKJ8 722 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 DTX4Q9Y2E6 619 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 PCDHGB3Q9Y5G1 929 aa13.8□□□□□ -0.2
GARNL3-204ENST00000429629 CCDC154A6NI56 674 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 OR6C70A6NIJ9 312 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 RFXANKO14593 260 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 TP53I11O14683 189 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 ZNF354AO60765 605 aaPredicted RBP13.79□□□□□ -0.2
GARNL3-204ENST00000429629 SHOX2O60902 331 aaPredicted RBP13.79□□□□□ -0.2
GARNL3-204ENST00000429629 PPM1BO75688 479 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 OR6B1O95007 311 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 AGR2O95994 175 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 HMGN2P05204 90 aaKnown RBP13.79□□□□□ -0.2
GARNL3-204ENST00000429629 SP1P08047 785 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 ABCD3P28288 659 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 SOX3P41225 446 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 CD97P48960 835 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 PNLIPRP2P54317 469 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 RPP38P78345 283 aaKnown RBP13.79□□□□□ -0.2
GARNL3-204ENST00000429629 PLEKHN1Q494U1 663 aaPredicted RBP13.79□□□□□ -0.2
GARNL3-204ENST00000429629 SPDYE7PQ495Y7 208 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 AGKQ53H12 422 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 COQ5Q5HYK3 327 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 CDC73Q6P1J9 531 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 C16orf47Q6ZP98 133 aaPredicted RBP13.79□□□□□ -0.2
GARNL3-204ENST00000429629 C6orf120Q7Z4R8 191 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 CYP4Z2PQ8N1L4 340 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 CATSPER1Q8NEC5 780 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 FAM110BQ8TC76 370 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 GTF2H4Q92759 462 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 NEURL3Q96EH8 262 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 SLC35A4Q96G79 324 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 PIGUQ9H490 435 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 ANKRA2Q9H9E1 313 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 Q9N2J8 555 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 CCDC167Q9P0B6 97 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 VPS4AQ9UN37 437 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 KLF13Q9Y2Y9 288 aaPredicted RBP13.79□□□□□ -0.2
GARNL3-204ENST00000429629 SNX8Q9Y5X2 465 aa13.79□□□□□ -0.2
GARNL3-204ENST00000429629 ASNA1O43681 348 aa13.78□□□□□ -0.2
GARNL3-204ENST00000429629 SLC25A12O75746 678 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms