RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 OR10H1Q9Y4A9 318 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 TPRP12270 2363 aaKnown RBP7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 SDK2Q58EX2 2172 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 NUP210LQ5VU65 1888 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 ACACBO00763 2458 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 PTPRBP23467 1997 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 C2orf92A0A1B0GVN3 265 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 MED19A0JLT2 244 aaPredicted RBP7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 FAM220BPB1ANY3 271 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 C5orf58C9J3I9 102 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 MASP2O00187 686 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 HMGN4O00479 90 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 GSTA4O15217 222 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 NKX2-8O15522 239 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 RRP8O43159 456 aaKnown RBP7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 ASNA1O43681 348 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 SLC28A2O43868 658 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 ZFAND5O76080 213 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 AGR2O95994 175 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 SERPINA7P05543 415 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 BCHEP06276 602 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 NUDT7P0C024 238 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 OR12D1P0DN82 309 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 GPX2P18283 190 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 WT1P19544 449 aaPredicted RBP7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 TCN1P20061 433 aaPredicted RBP7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 GABRA3P34903 492 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 PCGF2P35227 344 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 MAGEA8P43361 318 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 RFX3P48380 749 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 MVDP53602 400 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 EEFSECP57772 596 aaKnown RBP7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 TXNL4AP83876 142 aaKnown RBP7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 CDC20Q12834 499 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 CEACAM7Q14002 265 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 EBPQ15125 230 aaKnown RBP7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 DUSP5Q16690 384 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 DCAF10Q5QP82 559 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 IRAK1BP1Q5VVH5 260 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 CDC73Q6P1J9 531 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 ZCCHC12Q6PEW1 402 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 NPSR1Q6W5P4 371 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 ASRGL1Q7L266 308 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 GPR155Q7Z3F1 870 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 SERPINA11Q86U17 422 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 KBTBD2Q8IY47 623 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 ULK2Q8IYT8 1036 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 LGI4Q8N135 537 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 C10orf111Q8N326 155 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 AMER2Q8N7J2 671 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 SLC16A11Q8NCK7 471 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 APCDD1LQ8NCL9 501 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 C11orf65Q8NCR3 313 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 FAM156AQ8NDB6 213 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 TNIP2Q8NFZ5 429 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 M1APQ8TC57 530 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 MIPOL1Q8TD10 442 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 ADAMTS17Q8TE56 1095 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 THAP3Q8WTV1 239 aaPredicted RBP7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 XAGE5Q8WWM1 108 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 THAP4Q8WY91 577 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 GATA6Q92908 595 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 MAL2Q969L2 176 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 RMND5BQ96G75 393 aaPredicted RBP7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 REXO5Q96IC2 774 aaKnown RBP7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 IMMP1LQ96LU5 166 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 FER1L6-AS2Q96M78 137 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 BTBD9Q96Q07 612 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 CCNL2Q96S94 520 aaPredicted RBP7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 LMF2Q9BU23 707 aaKnown RBP7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 SPATA9Q9BWV2 254 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 CADM1Q9BY67 442 aaKnown RBP7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 DEFB126Q9BYW3 111 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 DPH1Q9BZG8 443 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 WWTR1Q9GZV5 400 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 NXF5Q9H1B4 397 aaKnown RBP7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 Q9N2J8 555 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 MMP25Q9NPA2 562 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 EXD2Q9NVH0 621 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 THUMPD1Q9NXG2 353 aaKnown RBP7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 GMPR2Q9P2T1 348 aaKnown RBP7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 P2RX2Q9UBL9 471 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 DKK4Q9UBT3 224 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 ZNF223Q9UK11 482 aaPredicted RBP7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 ANGPT4Q9Y264 503 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 GMEB1Q9Y692 573 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 CACNA1BQ00975 2339 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 FER1L5A0AVI2 2057 aa7.34□□□□□ -1.23
HMGA1P4-201ENST00000428643 AHCTF1Q8WYP5 2266 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 GXYLT2A0PJZ3 443 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 PRORSD1PA6NEY8 169 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 FRG2CA6NGY1 282 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 ARGFXA6NJG6 315 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 TTC36A6NLP5 189 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 DUXAA6NLW8 204 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 A8MUI8 341 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 A8MVJ9 347 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 ANKRD65E5RJM6 399 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 GSC2O15499 205 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 PRKNO60260 465 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms