RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 PIK3R3Q92569 461 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 FAM120BQ96EK7 910 aaKnown RBP6.5□□□□□ -1.37
CDC7-203ENST00000428239 C16orf58Q96GQ5 468 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 LCORQ96JN0 433 aaPredicted RBP6.5□□□□□ -1.37
CDC7-203ENST00000428239 ZNF681Q96N22 645 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 DOHHQ9BU89 302 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 TBL1XR1Q9BZK7 514 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 TSPAN10Q9H1Z9 355 aaPredicted RBP6.5□□□□□ -1.37
CDC7-203ENST00000428239 ZNF552Q9H707 407 aaPredicted RBP6.5□□□□□ -1.37
CDC7-203ENST00000428239 CXorf36Q9H7Y0 433 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 ASIC5Q9NY37 505 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 EXO1Q9UQ84 846 aaKnown RBP6.5□□□□□ -1.37
CDC7-203ENST00000428239 L3MBTL1Q9Y468 752 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 PCDHGB3Q9Y5G1 929 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 COL27A1Q8IZC6 1860 aaPredicted RBP6.5□□□□□ -1.37
CDC7-203ENST00000428239 TRAV17A0A0B4J275 112 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 OR5H15A6NDH6 313 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 ERVH48-1M5A8F1 160 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 UPK1AO00322 258 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 MATN1P21941 496 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 SLC37A1P57057 533 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 RPP38P78345 283 aaKnown RBP6.5□□□□□ -1.37
CDC7-203ENST00000428239 LRRC74AQ0VAA2 488 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 MAP4K2Q12851 820 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 MFAP5Q13361 173 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 EBPQ15125 230 aaKnown RBP6.5□□□□□ -1.37
CDC7-203ENST00000428239 GALNTL5Q7Z4T8 443 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 DHDDSQ86SQ9 333 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 C9orf40Q8IXQ3 194 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 CDRT4Q8N9R6 151 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 GATSQ8NAP1 163 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 TMEM178AQ8NBL3 297 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 OR5D16Q8NGK9 328 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 TMBIM1Q969X1 311 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 TESCQ96BS2 214 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 C11orf24Q96F05 449 aaPredicted RBP6.5□□□□□ -1.37
CDC7-203ENST00000428239 RASL10BQ96S79 203 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 PRORYQ9H606 182 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 TAS2R7Q9NYW3 318 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 SLC13A4Q9UKG4 626 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 NUP214P35658 2090 aaPredicted RBP6.5□□□□□ -1.37
CDC7-203ENST00000428239 NPIPB8E9PQR5 432 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 RNASET2O00584 256 aaKnown RBP6.5□□□□□ -1.37
CDC7-203ENST00000428239 ATXN7O15265 892 aaPredicted RBP6.5□□□□□ -1.37
CDC7-203ENST00000428239 SLC28A2O43868 658 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 MAN1A2O60476 641 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 TRAPPC6AO75865 159 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 OR6B1O95007 311 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 FAM107AO95990 144 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 CAPNS1P04632 268 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 IL12AP29459 219 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 NUDT2P50583 147 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 GPR68Q15743 365 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 SPRED3Q2MJR0 410 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 ZNF628Q5EBL2 1059 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 CCNJQ5T5M9 372 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 RNF130Q86XS8 419 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 EGFL6Q8IUX8 553 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 OR8J2Q8NGG1 315 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 RNF217Q8TC41 542 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 C10orf82Q8WW14 230 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 CMTM5Q96DZ9 223 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 OMA1Q96E52 524 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 NPAS2Q99743 824 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 ECSITQ9BQ95 431 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 SAR1AQ9NR31 198 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 GID8Q9NWU2 228 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 NPFFR2Q9Y5X5 522 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 MGAQ8IWI9 3026 aa6.5□□□□□ -1.37
CDC7-203ENST00000428239 USP24Q9UPU5 2620 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 TLN1Q9Y490 2541 aaKnown RBP6.49□□□□□ -1.37
CDC7-203ENST00000428239 OR6C76A6NM76 312 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 GMNNO75496 209 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 SLITRK5O94991 958 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 CBX7O95931 251 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 OR12D1P0DN82 309 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 ESRRAP11474 423 aaPredicted RBP6.49□□□□□ -1.37
CDC7-203ENST00000428239 GPX3P22352 226 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 UQCRC2P22695 453 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 KHKP50053 298 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 FBXW4P57775 412 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 DCAF7P61962 342 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 POU6F2P78424 691 aaPredicted RBP6.49□□□□□ -1.37
CDC7-203ENST00000428239 IGLV3-21P80748 117 aaPredicted RBP6.49□□□□□ -1.37
CDC7-203ENST00000428239 MRPS22P82650 360 aaKnown RBP6.49□□□□□ -1.37
CDC7-203ENST00000428239 PDE7AQ13946 482 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 PRSS53Q2L4Q9 553 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 GTDC1Q4AE62 458 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 ZNF766Q5HY98 468 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 CGB2Q6NT52 195 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 PPP4R4Q6NUP7 873 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 CDC73Q6P1J9 531 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 FAM180AQ6UWF9 173 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 SLC16A11Q8NCK7 471 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 NFAM1Q8NET5 270 aaPredicted RBP6.49□□□□□ -1.37
CDC7-203ENST00000428239 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.49□□□□□ -1.371e-7■■□□□ 12.5
CDC7-203ENST00000428239 ELP5Q8TE02 316 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 CDS1Q92903 461 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 MOAP1Q96BY2 351 aa6.49□□□□□ -1.37
CDC7-203ENST00000428239 COQ8BQ96D53 544 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms