RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 FBRSQ9HAH7 460 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 ENY2Q9NPA8 101 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 MYNNQ9NPC7 610 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 ZNF225Q9UK10 706 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 WASF3Q9UPY6 502 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 FEZF1A0PJY2 475 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 LAMP1P11279 417 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 FOXA1P55317 472 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.79□□□□□ -0.2
PTPRU-204ENST00000428026 RPS26P11Q5JNZ5 115 aaPredicted RBP13.79□□□□□ -0.2
PTPRU-204ENST00000428026 TMEM205Q6UW68 189 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 GPRIN1Q7Z2K8 1008 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 SYT14Q8NB59 555 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 TFAP2CQ92754 450 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 SSX3Q99909 188 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 IL37Q9NZH6 218 aa13.79□□□□□ -0.2
PTPRU-204ENST00000428026 MYH8P13535 1937 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 PTGESO14684 152 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 MAFKO60675 156 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 ACRV1P26436 265 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 SPCS2Q15005 226 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 NKPD1Q17RQ9 610 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 CLLU1OSQ5K130 101 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 C1orf220Q5T0J3 134 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 FCRLBQ6BAA4 426 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 GSG1LQ6UXU4 331 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 TTLL10Q6ZVT0 673 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 ISCA2Q86U28 154 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 OR52E2Q8NGJ4 325 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 OR51L1Q8NGJ5 315 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 BORCS8Q96FH0 119 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 CD300AQ9UGN4 299 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 SLC22A31A6NKX4 558 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 H3BQ06 376 aaPredicted RBP13.78□□□□□ -0.2
PTPRU-204ENST00000428026 RFPL3O75679 317 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 PRKCAP17252 672 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 ZNF611Q8N823 705 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 DCAF4L2Q8NA75 395 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 STK35Q8TDR2 534 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 MEIOCA2RUB1 952 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 SCAMP2O15127 329 aaKnown RBP13.78□□□□□ -0.2
PTPRU-204ENST00000428026 TGM5O43548 720 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 JUPP14923 745 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 POLR2CP19387 275 aaPredicted RBP13.78□□□□□ -0.2
PTPRU-204ENST00000428026 WDR5P61964 334 aaKnown RBP13.78□□□□□ -0.2
PTPRU-204ENST00000428026 KCNJ8Q15842 424 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 BATFQ16520 125 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 EOGTQ5NDL2 527 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 MLIPQ5VWP3 458 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 LAS2Q8IYD9 372 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 OR4K5Q8NGD3 323 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 OR4K13Q8NH42 304 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 ELP5Q8TE02 316 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 OR5B12Q96R08 314 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 SORT1Q99523 831 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 KCNS2Q9ULS6 477 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 LOC102723532A0A0G2JNH3 316 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 CAPN14A8MX76 684 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 CSTAP01040 98 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 ZNF252P-AS1Q0IIN9 211 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 SLAMF1Q13291 335 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 DYRK1AQ13627 763 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 GK2Q14410 553 aaPredicted RBP13.78□□□□□ -0.2
PTPRU-204ENST00000428026 RNASE10Q5GAN6 216 aaKnown RBP13.78□□□□□ -0.2
PTPRU-204ENST00000428026 KCTD18Q6PI47 426 aaPredicted RBP13.78□□□□□ -0.2
PTPRU-204ENST00000428026 NRROSQ86YC3 692 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 THRSPQ92748 146 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 TMEM19Q96HH6 336 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 KATNBL1Q9H079 304 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 NMNAT1Q9HAN9 279 aaPredicted RBP13.78□□□□□ -0.2
PTPRU-204ENST00000428026 RXFP3Q9NSD7 469 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 IGSF5Q9NSI5 407 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 PCTPQ9UKL6 214 aa13.78□□□□□ -0.2
PTPRU-204ENST00000428026 MBLAC1A4D2B0 266 aaPredicted RBP13.77□□□□□ -0.2
PTPRU-204ENST00000428026 IFNA5P01569 189 aa13.77□□□□□ -0.2
PTPRU-204ENST00000428026 ASGR2P07307 311 aa13.77□□□□□ -0.2
PTPRU-204ENST00000428026 CAPZA1P52907 286 aa13.77□□□□□ -0.2
PTPRU-204ENST00000428026 CLRN1P58418 232 aa13.77□□□□□ -0.2
PTPRU-204ENST00000428026 TBPL1P62380 186 aa13.77□□□□□ -0.2
PTPRU-204ENST00000428026 ZNF789Q5FWF6 425 aa13.77□□□□□ -0.2
PTPRU-204ENST00000428026 ALG10BQ5I7T1 473 aa13.77□□□□□ -0.2
PTPRU-204ENST00000428026 OR13C3Q8NGS6 347 aa13.77□□□□□ -0.2
PTPRU-204ENST00000428026 TMEM125Q96AQ2 219 aa13.77□□□□□ -0.2
PTPRU-204ENST00000428026 METTL7AQ9H8H3 244 aa13.77□□□□□ -0.2
PTPRU-204ENST00000428026 KLHL9Q9P2J3 617 aa13.77□□□□□ -0.2
PTPRU-204ENST00000428026 TRAV18A0A075B6X5 111 aa13.77□□□□□ -0.2
PTPRU-204ENST00000428026 LRRTM2O43300 516 aa13.77□□□□□ -0.2
PTPRU-204ENST00000428026 STK19P49842 368 aaPredicted RBP13.77□□□□□ -0.2
PTPRU-204ENST00000428026 PROX2Q3B8N5 592 aa13.77□□□□□ -0.2
PTPRU-204ENST00000428026 MEX3DQ86XN8 651 aaKnown RBP13.77□□□□□ -0.2
PTPRU-204ENST00000428026 HUS1BQ8NHY5 278 aa13.77□□□□□ -0.2
PTPRU-204ENST00000428026 GAB3Q8WWW8 586 aa13.77□□□□□ -0.2
PTPRU-204ENST00000428026 TCEAL3Q969E4 200 aa13.77□□□□□ -0.2
PTPRU-204ENST00000428026 CNN2Q99439 309 aaKnown RBP13.77□□□□□ -0.2
PTPRU-204ENST00000428026 ZNF850A8MQ14 1090 aa13.77□□□□□ -0.21
PTPRU-204ENST00000428026 HCRTR2O43614 444 aa13.77□□□□□ -0.21
PTPRU-204ENST00000428026 OR8U9P0C7N5 309 aa13.77□□□□□ -0.21
PTPRU-204ENST00000428026 DHRS4L1P0CG22 281 aa13.77□□□□□ -0.21
PTPRU-204ENST00000428026 SLC5A2P31639 672 aa13.77□□□□□ -0.21
PTPRU-204ENST00000428026 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms