RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 REM1O75628 298 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 C8BP07358 591 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 PAX1P15863 534 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 S1PR1P21453 382 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 KIR2DL2P43627 348 aaPredicted RBP13.24□□□□□ -0.29
PDAP1-202ENST00000426447 NEK2P51955 445 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 EEFSECP57772 596 aaKnown RBP13.24□□□□□ -0.29
PDAP1-202ENST00000426447 RAB10P61026 200 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 VEZF1Q14119 521 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 EXOSC7Q15024 291 aaKnown RBP13.24□□□□□ -0.29
PDAP1-202ENST00000426447 BCL2A1Q16548 175 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 CLEC12BQ2HXU8 276 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 EXOC3L2Q2M3D2 409 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 BEX5Q5H9J7 111 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 FAM111BQ6SJ93 734 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 ZNF704Q6ZNC4 412 aaPredicted RBP13.24□□□□□ -0.29
PDAP1-202ENST00000426447 ISCA2Q86U28 154 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 ZBED8Q8IZ13 594 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 MARK4Q96L34 752 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 COL21A1Q96P44 957 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 GPR22Q99680 433 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 SMYD2Q9NRG4 433 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 ZNF701Q9NV72 531 aaPredicted RBP13.24□□□□□ -0.29
PDAP1-202ENST00000426447 HEY2Q9UBP5 337 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 PROCRQ9UNN8 238 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 PPP2R2CQ9Y2T4 447 aa13.24□□□□□ -0.29
PDAP1-202ENST00000426447 MRPS18CQ9Y3D5 142 aaKnown RBP13.24□□□□□ -0.29
PDAP1-202ENST00000426447 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.23□□□□□ -0.29
PDAP1-202ENST00000426447 LRRC14BA6NHZ5 514 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 GOLGA6L10A6NI86 522 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 EFCAB8A8MWE9 144 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 EMC8O43402 210 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 ABCB7O75027 752 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 TMCC2O75069 709 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 KLK1P06870 262 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 PEPDP12955 493 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 DRD5P21918 477 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 DPP4P27487 766 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 LOXP28300 417 aaPredicted RBP13.23□□□□□ -0.29
PDAP1-202ENST00000426447 CCKARP32238 428 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 GMPRP36959 345 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 ARL1P40616 181 aaPredicted RBP13.23□□□□□ -0.29
PDAP1-202ENST00000426447 MAP4K2Q12851 820 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 FGFBP1Q14512 234 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 C10orf62Q5T681 223 aaPredicted RBP13.23□□□□□ -0.29
PDAP1-202ENST00000426447 C22orf34Q6ZV56 151 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 SH2D5Q6ZV89 423 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 TBC1D1Q86TI0 1168 aaPredicted RBP13.23□□□□□ -0.29
PDAP1-202ENST00000426447 GAS2L3Q86XJ1 694 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 KLHL7Q8IXQ5 586 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 UBTD2Q8WUN7 234 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 FIG4Q92562 907 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 CAVIN3Q969G5 261 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 SERPINI1Q99574 410 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 RBBP8Q99708 897 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 CPNE1Q99829 537 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 TRIM31Q9BZY9 425 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 YAE1D1Q9NRH1 226 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 PSD3Q9NYI0 1048 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 PRODH2Q9UF12 536 aa13.23□□□□□ -0.29
PDAP1-202ENST00000426447 CXorf49A8MYA2 514 aaPredicted RBP13.22□□□□□ -0.29
PDAP1-202ENST00000426447 FOXE1O00358 373 aaPredicted RBP13.22□□□□□ -0.29
PDAP1-202ENST00000426447 ZIC3O60481 467 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 KERAO60938 352 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 ERAL1O75616 437 aaKnown RBP13.22□□□□□ -0.29
PDAP1-202ENST00000426447 CGAP01215 116 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 CD8BP10966 210 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 KRT20P35900 424 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 FEN1P39748 380 aaKnown RBP13.22□□□□□ -0.29
PDAP1-202ENST00000426447 PPICP45877 212 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 PIK3CGP48736 1102 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 DR1Q01658 176 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 KRTAP1-1Q07627 177 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 PRICKLE4Q2TBC4 344 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 CCNYL2Q5T2Q4 361 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 OR4K17Q8NGC6 315 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 OR52R1Q8NGF1 315 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 PYROXD1Q8WU10 500 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 TMBIM1Q969X1 311 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 TRMT61AQ96FX7 289 aaKnown RBP13.22□□□□□ -0.29
PDAP1-202ENST00000426447 ATOH8Q96SQ7 321 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 ADOQ96SZ5 270 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 PINK1Q9BXM7 581 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 IPPKQ9H8X2 491 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 AHSPQ9NZD4 102 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 LAMP3Q9UQV4 416 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 PLLPQ9Y342 182 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 RNF11Q9Y3C5 154 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 TLN2Q9Y4G6 2542 aa13.22□□□□□ -0.29
PDAP1-202ENST00000426447 ATRQ13535 2644 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 A0A087X1B8 175 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 OR6C70A6NIJ9 312 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 SYCE1LA8MT33 242 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 KLF4O43474 513 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 UGDHO60701 494 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 GUCY1B2O75343 617 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 TNFRSF21O75509 655 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 PLAUP00749 431 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 LTA4HP09960 611 aaKnown RBP13.21□□□□□ -0.29
PDAP1-202ENST00000426447 GFAPP14136 432 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms