RNA–Protein interactions for RNA: ENST00000425967.7

FGFR1-211, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 5,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-211ENST00000425967 PTGDR2Q9Y5Y4 395 aa12□□□□□ -0.49
FGFR1-211ENST00000425967 PIK3C2AO00443 1686 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 PRAMEF26H0Y7S4 382 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 MEN1O00255 615 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 FANCGO15287 622 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 FNTBP49356 437 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 ART1P52961 327 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 PGGT1BP53609 377 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 TDGQ13569 410 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 FGL2Q14314 439 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 GRIN2CQ14957 1233 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 C22orf42Q6IC83 251 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 TMEM205Q6UW68 189 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 ISOC1Q96CN7 298 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 TREX2Q9BQ50 279 aaPredicted RBP11.99□□□□□ -0.49
FGFR1-211ENST00000425967 CPEB1Q9BZB8 566 aaKnown RBP11.99□□□□□ -0.49
FGFR1-211ENST00000425967 FAM53CQ9NYF3 392 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 IGKV6-21A0A0C4DH24 114 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 CD8B2A6NJW9 211 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 M0QZQ0 153 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 KIAA0355O15063 1070 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 CD8BP10966 210 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 CYBAP13498 195 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 RAC2P15153 192 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 PITPNBP48739 271 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 CTXN1P60606 82 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 COMMD6Q7Z4G1 85 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 OR4K13Q8NH42 304 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 SLC41A3Q96GZ6 507 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 STUB1Q9UNE7 303 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 PARP4Q9UKK3 1724 aaKnown RBP11.99□□□□□ -0.49
FGFR1-211ENST00000425967 MYADML2A6NDP7 307 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 PRLP01236 227 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 ETFAP13804 333 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 TUBG1P23258 451 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 S100PP25815 95 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 MAP2K3P46734 347 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 TRAPPC6BQ86SZ2 158 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 COQ8AQ8NI60 647 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 RHBDD1Q8TEB9 315 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 L3HYPDHQ96EM0 354 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 LMAN1LQ9HAT1 526 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 MAS1P04201 325 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 H2AFB2P0C5Z0 115 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 HOXA11P31270 313 aaPredicted RBP11.99□□□□□ -0.49
FGFR1-211ENST00000425967 PSPHP78330 225 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 TMEM173Q86WV6 379 aaPredicted RBP11.99□□□□□ -0.49
FGFR1-211ENST00000425967 SPTSSAQ969W0 71 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 MS4A4EQ96PG1 132 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 SOX17Q9H6I2 414 aaPredicted RBP11.99□□□□□ -0.49
FGFR1-211ENST00000425967 GDE1Q9NZC3 331 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 PCTPQ9UKL6 214 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 SPEF2Q9C093 1822 aa11.99□□□□□ -0.49
FGFR1-211ENST00000425967 CACNA1FO60840 1977 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 NUDT1P36639 197 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 PRPS1P60891 318 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 FGL1Q08830 312 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 APOFQ13790 326 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 ZNF181Q2M3W8 571 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 COL28A1Q2UY09 1125 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 BTBD16Q32M84 506 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 CDRT4Q8N9R6 151 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 GCDHQ92947 438 aaPredicted RBP11.98□□□□□ -0.49
FGFR1-211ENST00000425967 RRNAD1Q96FB5 475 aaKnown RBP11.98□□□□□ -0.49
FGFR1-211ENST00000425967 FAM46AQ96IP4 442 aaKnown RBP11.98□□□□□ -0.49
FGFR1-211ENST00000425967 CRB3Q9BUF7 120 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 ALOXE3Q9BYJ1 711 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 CWH43Q9H720 699 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 RAB9BQ9NP90 201 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 REV1Q9UBZ9 1251 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 PEAK1Q9H792 1746 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 SLC16A8O95907 504 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 TMEM225BP0DP42 221 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 ZNF28P17035 718 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 GGT1P19440 569 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 SLC6A8P48029 635 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 DEFB110Q30KQ9 67 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 RNASE10Q5GAN6 216 aaKnown RBP11.98□□□□□ -0.49
FGFR1-211ENST00000425967 CBARPQ8N350 705 aaPredicted RBP11.98□□□□□ -0.49
FGFR1-211ENST00000425967 CHPT1Q8WUD6 406 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 RANBP3Q9H6Z4 567 aaPredicted RBP11.98□□□□□ -0.49
FGFR1-211ENST00000425967 CD93Q9NPY3 652 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 C10orf71Q711Q0 1435 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 CICQ96RK0 1608 aaPredicted RBP11.98□□□□□ -0.49
FGFR1-211ENST00000425967 PTGESO14684 152 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 UGDHO60701 494 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 CA3P07451 260 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 STSP08842 583 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 TLE3Q04726 772 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 SNTB2Q13425 540 aaKnown RBP11.98□□□□□ -0.49
FGFR1-211ENST00000425967 ZNF551Q7Z340 670 aaPredicted RBP11.98□□□□□ -0.49
FGFR1-211ENST00000425967 CLECL1Q8IZS7 167 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 GALNT6Q8NCL4 622 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 OR4K5Q8NGD3 323 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 FUBP1Q96AE4 644 aaKnown RBP11.98□□□□□ -0.49
FGFR1-211ENST00000425967 RHBDF1Q96CC6 855 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 MAP3K3Q99759 626 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 SYT3Q9BQG1 590 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 APOOQ9BUR5 198 aa11.98□□□□□ -0.49
FGFR1-211ENST00000425967 BOCQ9BWV1 1114 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms