RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 OR5K1Q8NHB7 308 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 CIDECQ96AQ7 238 aaPredicted RBP14.61□□□□□ -0.07
SHOX2-202ENST00000425436 SPSB2Q99619 263 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 SLC26A1Q9H2B4 701 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 ZNF696Q9H7X3 374 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 NTN4Q9HB63 628 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 CPNE5Q9HCH3 593 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 LYARQ9NX58 379 aaKnown RBP14.61□□□□□ -0.07
SHOX2-202ENST00000425436 PCDHGA6Q9Y5G7 932 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 IGLV3-12A0A075B6K2 115 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 PDLIM1O00151 329 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 SUV39H1O43463 412 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 TMPRSS11DO60235 418 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 B4GALT2O60909 372 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 TNFRSF21O75509 655 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 ALDH9A1P49189 494 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 LIM2P55344 173 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 LRRC23Q53EV4 343 aaPredicted RBP14.61□□□□□ -0.07
SHOX2-202ENST00000425436 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.61□□□□□ -0.07
SHOX2-202ENST00000425436 ATP1A1-AS1Q5TC04 95 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 MFSD4BQ5TF39 518 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 MRM1Q6IN84 353 aaKnown RBP14.61□□□□□ -0.07
SHOX2-202ENST00000425436 ANGPTL8Q6UXH0 198 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 CCDC81Q6ZN84 652 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 CCDC80Q76M96 950 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 PIWIL3Q7Z3Z3 882 aaKnown RBP14.61□□□□□ -0.07
SHOX2-202ENST00000425436 DHRSXQ8N5I4 330 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 PSMA8Q8TAA3 256 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 LZICQ8WZA0 190 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 TMBIM1Q969X1 311 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 MAPKAP1Q9BPZ7 522 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 RBM4BQ9BQ04 359 aaKnown RBP14.61□□□□□ -0.07
SHOX2-202ENST00000425436 ADI1Q9BV57 179 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 RBM4Q9BWF3 364 aaKnown RBP14.61□□□□□ -0.07
SHOX2-202ENST00000425436 WDR54Q9H977 334 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 PRDM9Q9NQV7 894 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 PNPLA3Q9NST1 481 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 KCMF1Q9P0J7 381 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 FBXW2Q9UKT8 454 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 PSME2Q9UL46 239 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 PADI2Q9Y2J8 665 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 ZNF451Q9Y4E5 1061 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 UPK1AO00322 258 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 EI24O14681 340 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 ZNF682O95780 498 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 UMODP07911 640 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 PRKAR1AP10644 381 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 EFNA1P20827 205 aaPredicted RBP14.6□□□□□ -0.07
SHOX2-202ENST00000425436 NTSP30990 170 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 FOLR3P41439 243 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 ANXA11P50995 505 aaKnown RBP14.6□□□□□ -0.07
SHOX2-202ENST00000425436 EFNA3P52797 238 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 MVDP53602 400 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 IL10RAQ13651 578 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 DAG1Q14118 895 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 RFX4Q33E94 735 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 SLC36A3Q495N2 470 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 MINDY4Q4G0A6 757 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 BROXQ5VW32 411 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 FAAH2Q6GMR7 532 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 BHLHB9Q6PI77 547 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 ZDHHC21Q8IVQ6 265 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 CLEC4FQ8N1N0 589 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 METTL25Q8N6Q8 603 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 OR2Y1Q8NGV0 311 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 PNPT1Q8TCS8 783 aaKnown RBP14.6□□□□□ -0.07
SHOX2-202ENST00000425436 MAGEE2Q8TD90 523 aaPredicted RBP14.6□□□□□ -0.07
SHOX2-202ENST00000425436 NEURL3Q96EH8 262 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 NRBF2Q96F24 287 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 MESP1Q9BRJ9 268 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 NPLQ9BXD5 320 aaPredicted RBP14.6□□□□□ -0.07
SHOX2-202ENST00000425436 TGIF2Q9GZN2 237 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 FAM192AQ9GZU8 254 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 UBAP1Q9NZ09 502 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 USE1Q9NZ43 259 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 MKL2Q9ULH7 1088 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 DAPP1Q9UN19 280 aa14.6□□□□□ -0.07
SHOX2-202ENST00000425436 FABP3P05413 133 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 FHP07954 510 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 CD63P08962 238 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 RNH1P13489 461 aaKnown RBP14.59□□□□□ -0.07
SHOX2-202ENST00000425436 MYF6P23409 242 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 OTX2P32243 289 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 SOAT1P35610 550 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 CAPGP40121 348 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 NDUFAF5Q5TEU4 345 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 STK32CQ86UX6 486 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 SAMD14Q8IZD0 417 aaPredicted RBP14.59□□□□□ -0.07
SHOX2-202ENST00000425436 FAM86B1Q8N7N1 296 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 TMEM52Q8NDY8 209 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 MOAP1Q96BY2 351 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 CSF3RQ99062 836 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 DOHHQ9BU89 302 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 CRB3Q9BUF7 120 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 EPS8L2Q9H6S3 715 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 SLC35C2Q9NQQ7 365 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 LANCL2Q9NS86 450 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 GIMAP4Q9NUV9 329 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 NDUFA13Q9P0J0 144 aa14.59□□□□□ -0.07
SHOX2-202ENST00000425436 C3orf18Q9UK00 162 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms