RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 NSMCE4AQ9NXX6 385 aa2.75□□□□□ -1.97
LINC01040-201ENST00000425048 C6orf203Q9P0P8 240 aaPredicted RBP2.75□□□□□ -1.97
LINC01040-201ENST00000425048 HEY1Q9Y5J3 304 aa2.75□□□□□ -1.97
LINC01040-201ENST00000425048 GRIN2BQ13224 1484 aa2.75□□□□□ -1.97
LINC01040-201ENST00000425048 MAGI2Q86UL8 1455 aa2.75□□□□□ -1.97
LINC01040-201ENST00000425048 MYH7BA7E2Y1 1941 aa2.75□□□□□ -1.97
LINC01040-201ENST00000425048 CHD4Q14839 1912 aa2.75□□□□□ -1.97
LINC01040-201ENST00000425048 NOS1P29475 1434 aa2.75□□□□□ -1.97
LINC01040-201ENST00000425048 FAM135BQ49AJ0 1406 aa2.75□□□□□ -1.97
LINC01040-201ENST00000425048 TTC21AQ8NDW8 1320 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 KIAA0586Q9BVV6 1533 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 WDR7Q9Y4E6 1490 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 A0A0J9YVX5 310 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 GOLGA6L7A0A1B0GV03 622 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 CCDC162PA2VCL2 907 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 LRRD1A4D1F6 860 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 GOLGA6L4A6NEF3 574 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 NDUFAB1O14561 156 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 PPIP5K2O43314 1243 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 DFNA5O60443 496 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 DIAPH2O60879 1101 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 CA11O75493 328 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 GJB5O95377 273 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 CLTAP09496 248 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 GSTT2P0CG29 244 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 GSTT2BP0CG30 244 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 NR2F1P10589 423 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 EPB41P11171 864 aaKnown RBP2.74□□□□□ -1.97
LINC01040-201ENST00000425048 RPA1P27694 616 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 S100A5P33763 92 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 CRKLP46109 303 aaKnown RBP2.74□□□□□ -1.97
LINC01040-201ENST00000425048 FHITP49789 147 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 MTTPP55157 894 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 RPP38P78345 283 aaKnown RBP2.74□□□□□ -1.97
LINC01040-201ENST00000425048 MSLNQ13421 630 aaPredicted RBP2.74□□□□□ -1.97
LINC01040-201ENST00000425048 INAQ16352 499 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 RABL6Q3YEC7 729 aaPredicted RBP2.74□□□□□ -1.97
LINC01040-201ENST00000425048 CCDC152Q4G0S7 254 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 C11orf57Q6ZUT1 292 aaPredicted RBP2.74□□□□□ -1.97
LINC01040-201ENST00000425048 PLPPR4Q7Z2D5 763 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 DZIP1Q86YF9 867 aaKnown RBP2.74□□□□□ -1.97
LINC01040-201ENST00000425048 ZNF561Q8N587 486 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 ZNF713Q8N859 430 aaPredicted RBP2.74□□□□□ -1.97
LINC01040-201ENST00000425048 PI4KAP1Q8N8J0 262 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 OR13F1Q8NGS4 319 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 ZNF671Q8TAW3 534 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 TBC1D31Q96DN5 1066 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 GSDMAQ96QA5 445 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 TTYH2Q9BSA4 534 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 TNMDQ9H2S6 317 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 RABEP2Q9H5N1 569 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.74□□□□□ -1.97
LINC01040-201ENST00000425048 ZNHIT6Q9NWK9 470 aaKnown RBP2.74□□□□□ -1.97
LINC01040-201ENST00000425048 SWAP70Q9UH65 585 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 CCPG1Q9ULG6 757 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 PRELID1Q9Y255 219 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 LRRC42Q9Y546 428 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 KIF13AQ9H1H9 1805 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 DNMT1P26358 1616 aaKnown RBP2.74□□□□□ -1.97
LINC01040-201ENST00000425048 ABCA6Q8N139 1617 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 SSH2Q76I76 1423 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 CASKIN1Q8WXD9 1431 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 ADGRL3Q9HAR2 1447 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 ADCY9O60503 1353 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 TMEM94Q12767 1356 aa2.74□□□□□ -1.97
LINC01040-201ENST00000425048 IFT172Q9UG01 1749 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 CRYBG1Q9Y4K1 1723 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 HIVEP2P31629 2446 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 ABCC6O95255 1503 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 URB2Q14146 1524 aaKnown RBP2.73□□□□□ -1.97
LINC01040-201ENST00000425048 ASXL1Q8IXJ9 1541 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 PSME4Q14997 1843 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 SYNJ2O15056 1496 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 MYH10P35580 1976 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 A0A1W2PQ67 120 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 FAM25EA8MYX2 175 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 FLRT2O43155 660 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 FIBPO43427 364 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 B4GAT1O43505 415 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 PFKFB2O60825 505 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 SERPINB7O75635 380 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 WDHD1O75717 1129 aaPredicted RBP2.73□□□□□ -1.97
LINC01040-201ENST00000425048 GNA14O95837 355 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 GSTA1P08263 222 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 TOP1P11387 765 aaKnown RBP2.73□□□□□ -1.97
LINC01040-201ENST00000425048 CCT6AP40227 531 aaKnown RBP2.73□□□□□ -1.97
LINC01040-201ENST00000425048 RIPPLY3P57055 190 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 HPCAP84074 193 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 MZT1Q08AG7 82 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 WASHC5Q12768 1159 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 ASAH1Q13510 395 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 CCDC14Q49A88 953 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 BOLA3Q53S33 107 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 TTMPQ5BVD1 217 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 ANKRD20A2Q5SQ80 823 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 ANKRD20A1Q5TYW2 823 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 AGBL2Q5U5Z8 902 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 ANKRD20A3Q5VUR7 823 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 CST9LP1Q5W188 147 aa2.73□□□□□ -1.97
LINC01040-201ENST00000425048 KCTD16Q68DU8 428 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms