RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 ZFP28Q8NHY6 868 aa20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 SPPL2AQ8TCT8 520 aa20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 MTERF3Q96E29 417 aa20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 BTBD9Q96Q07 612 aa20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 DOHHQ9BU89 302 aa20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 DEFB127Q9H1M4 99 aa20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 TAS2R9Q9NYW1 312 aa20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 HAO1Q9UJM8 370 aa20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 BOKQ9UMX3 212 aaPredicted RBP20.52■□□□□ 0.88
PTCHD3P2-201ENST00000424937 NUP214P35658 2090 aaPredicted RBP20.52■□□□□ 0.87
PTCHD3P2-201ENST00000424937 A0A087WV62 115 aa20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 A0A1B0GUH1 482 aa20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 SCAMP2O15127 329 aaKnown RBP20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 PDE9AO76083 593 aa20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 GLSO94925 669 aaPredicted RBP20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ABCB1P08183 1280 aaPredicted RBP20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 PRPS2P11908 318 aa20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 GPC1P35052 558 aa20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 MAGEA5P43359 124 aa20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 CASP6P55212 293 aa20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 PER3P56645 1201 aa20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 RPP38P78345 283 aaKnown RBP20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 MAD2L1Q13257 205 aaPredicted RBP20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 RGS9BPQ6ZS82 235 aa20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 SLC34A3Q8N130 599 aa20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 FAM109AQ8N4B1 249 aa20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 TMEM251Q8N6I4 163 aa20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ELP4Q96EB1 424 aa20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ZBED6CLQ96FA7 236 aaPredicted RBP20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 JSRP1Q96MG2 331 aaPredicted RBP20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 PROK2Q9HC23 129 aa20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 PNPOQ9NVS9 261 aa20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 TINAGQ9UJW2 476 aa20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 C19orf53Q9UNZ5 99 aaPredicted RBP20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 EIF3LQ9Y262 564 aaKnown RBP20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 GPR55Q9Y2T6 319 aaPredicted RBP20.51■□□□□ 0.87
PTCHD3P2-201ENST00000424937 HECTD1Q9ULT8 2610 aa20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 UPK1AO00322 258 aa20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 PLOD2O00469 737 aa20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 TO15178 435 aa20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 H2AFXP16104 143 aaPredicted RBP20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 NAGAP17050 411 aa20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 DDX5P17844 614 aaKnown RBP20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 RPL3P39023 403 aaKnown RBP20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 CA7P43166 264 aa20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 C3AR1Q16581 482 aa20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 TBCELQ5QJ74 424 aa20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 NPSR1Q6W5P4 371 aa20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 SPPL2CQ8IUH8 684 aa20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 OR2L13Q8N349 312 aa20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 TMBIM1Q969X1 311 aa20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ZNF597Q96LX8 424 aa20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 SECISBP2Q96T21 854 aaKnown RBP20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 NUF2Q9BZD4 464 aa20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ZDHHC11Q9H8X9 412 aa20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ATP6V1HQ9UI12 483 aa20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ZNF835Q9Y2P0 537 aa20.5■□□□□ 0.87
PTCHD3P2-201ENST00000424937 USP9YO00507 2555 aaPredicted RBP20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 FLNBO75369 2602 aaKnown RBP20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 A0A1B0GTH9 108 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 LRRC3CA6NJW4 275 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 CT45A8P0DMV1 189 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 CT45A9P0DMV2 189 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 EFNA1P20827 205 aaPredicted RBP20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 MANFP55145 182 aaKnown RBP20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 CT45A2Q5DJT8 189 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ATG16L1Q676U5 607 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 DESI1Q6ICB0 168 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 HDXQ7Z353 690 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 SZRD1Q7Z422 152 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 FGD2Q7Z6J4 655 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 SLC44A2Q8IWA5 706 aaPredicted RBP20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 CHERPQ8IWX8 916 aaKnown RBP20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 TRIM42Q8IWZ5 723 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 OR7A2PQ8NGA2 310 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 RELTQ969Z4 430 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 RILPQ96NA2 401 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ZNF703Q9H7S9 590 aaPredicted RBP20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 METTL7AQ9H8H3 244 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 AKTIPQ9H8T0 292 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ZFP64Q9NPA5 681 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 THAP1Q9NVV9 213 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 NOP53Q9NZM5 478 aaKnown RBP20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 OR10H1Q9Y4A9 318 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 LIPGQ9Y5X9 500 aa20.49■□□□□ 0.87
PTCHD3P2-201ENST00000424937 DOPEY1Q5JWR5 2465 aa20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ANKRD33BA6NCL7 494 aa20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 CCL21O00585 134 aa20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 UGT2B11O75310 529 aa20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 SNNO75324 88 aaPredicted RBP20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 REM1O75628 298 aa20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 PSMG1O95456 288 aa20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 G6PDP11413 515 aa20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 KRT20P35900 424 aa20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 FRKP42685 505 aaPredicted RBP20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 CDK9P50750 372 aaKnown RBP20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 EMX2Q04743 252 aa20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 HYAL4Q2M3T9 481 aa20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 TTMPQ5BVD1 217 aa20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 Q6ZPB1 254 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms