RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 RNGTTO60942 597 aaKnown RBP10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 S100A6P06703 90 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 ANXA5P08758 320 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 CTGFP29279 349 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 TRIM23P36406 574 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 ALDH9A1P49189 494 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 ZNF157P51786 506 aaPredicted RBP10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 ACLYP53396 1101 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 UBE2MP61081 183 aaKnown RBP10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 DGCR2P98153 550 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 DUSP4Q13115 394 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 C3P1Q6ZMU1 363 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 HTR3DQ70Z44 454 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 KLBQ86Z14 1044 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 NPAS3Q8IXF0 933 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 ZBTB2Q8N680 514 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 ATAD1Q8NBU5 361 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 CNOT9Q92600 299 aaKnown RBP10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 RNFT2Q96EX2 444 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 MYO15AQ9UKN7 3530 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 ARL5CA6NH57 179 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 KRBOX1C9JBD0 128 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 ARPC5O15511 151 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 SH3BP5O60239 455 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 RAB36O95755 333 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 IFNW1P05000 195 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 SMIM10L2AP0DMW4 78 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 SMIM10L2BP0DMW5 78 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 OSMP13725 252 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 HOXD9P28356 352 aaPredicted RBP10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 ATP6V1E1P36543 226 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 SGSHP51688 502 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 XKR6Q5GH73 641 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 NHLRC1Q6VVB1 395 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 RFLNAQ6ZTI6 216 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 UBE2R2Q712K3 238 aaPredicted RBP10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 CDH26Q8IXH8 852 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 SLC7A13Q8TCU3 470 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 CMTM7Q96FZ5 175 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 OR10A4Q9H209 315 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 SLC32A1Q9H598 525 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 ESRP2Q9H6T0 727 aaKnown RBP10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 SYNDIG1Q9H7V2 258 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 STARD7Q9NQZ5 370 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 CA10Q9NS85 328 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 ANKRD36A6QL64 1941 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 F8W036 122 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 SMAD9O15198 467 aaKnown RBP10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 NDUFS6O75380 124 aaKnown RBP10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 CLDN7O95471 211 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 NMBP08949 121 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 PTHLHP12272 177 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 DGKAP23743 735 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 SHC1P29353 583 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 MTAPQ13126 283 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 MAP2K5Q13163 448 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 FAM74A1Q5RGS3 127 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 QSOX2Q6ZRP7 698 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 TMPRSS9Q7Z410 1059 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 DBF4BQ8NFT6 615 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 HGDQ93099 445 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 ZNF582Q96NG8 517 aaPredicted RBP10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 ELAC1Q9H777 363 aaKnown RBP10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 ISG20L2Q9H9L3 353 aaKnown RBP10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 SEMA3GQ9NS98 782 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 C5AR2Q9P296 337 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 RASD1Q9Y272 281 aa10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 ZFP37Q9Y6Q3 630 aaPredicted RBP10.66□□□□□ -0.7
SEC61A1-202ENST00000424880 ZC3H12DA2A288 527 aaKnown RBP10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 K7ERQ8 282 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 TNFRSF10BO14763 440 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 MID1O15344 667 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 SPDEFO95238 335 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 EPOP01588 193 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 BCHEP06276 602 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 UCHL1P09936 223 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 BEX3Q00994 111 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 IRF8Q02556 426 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 SRSF11Q05519 484 aaKnown RBP10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 LTB4RQ15722 352 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 ZNF770Q6IQ21 691 aaPredicted RBP10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 RRM2BQ7LG56 351 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 TMPRSS11BQ86T26 416 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 TOMM5Q8N4H5 51 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 OR4D11Q8NGI4 311 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 H2AFJQ9BTM1 129 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 PRDM9Q9NQV7 894 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 ASIC5Q9NY37 505 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 COA4Q9NYJ1 87 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 MARCH2Q9P0N8 246 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 PTGFRNQ9P2B2 879 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 VPS29Q9UBQ0 182 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 FCF1Q9Y324 198 aaKnown RBP10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 SZT2Q5T011 3432 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 GLYATL1P3A0A0U1RQE8 302 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 F2P00734 622 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 RD3LP0DJH9 198 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 ZNF7P17097 686 aaPredicted RBP10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 AHCYP23526 432 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 SLC6A4P31645 630 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms