RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 OR2L5Q8NG80 312 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 OR4K1Q8NGD4 311 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 MRAPQ8TCY5 172 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 LPGAT1Q92604 370 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 HPS1Q92902 700 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 NEIL2Q969S2 332 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 ZNF775Q96BV0 537 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-203ENST00000424270 MS4A6EQ96DS6 147 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 SMIM10Q96HG1 83 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 REXO5Q96IC2 774 aaKnown RBP5.61□□□□□ -1.51
SDCBP-203ENST00000424270 DUX5Q96PT3 197 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 TRIM54Q9BYV2 358 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 PARVBQ9HBI1 364 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 MYNNQ9NPC7 610 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 CHRAC1Q9NRG0 131 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 SMYD2Q9NRG4 433 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 HIF1ANQ9NWT6 349 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 EHD3Q9NZN3 535 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 WHRNQ9P202 907 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 STOML1Q9UBI4 398 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 DMGDHQ9UI17 866 aaKnown RBP5.61□□□□□ -1.51
SDCBP-203ENST00000424270 FBXL2Q9UKC9 423 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 ADAMTS6Q9UKP5 1117 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 MCTS1Q9ULC4 181 aaKnown RBP5.61□□□□□ -1.51
SDCBP-203ENST00000424270 RIMKLBQ9ULI2 386 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 MGAT4BQ9UQ53 548 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 PDE10AQ9Y233 779 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 GOLGA6L10A0A0M3HER8 536 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 LRIT2A6NDA9 550 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 M0R1B8 84 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 TIMM23O14925 209 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 CLGNO14967 610 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 FGF17O60258 216 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 CLEC3AO75596 197 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 PPM1BO75688 479 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 PDE5AO76074 875 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 NTN1O95631 604 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 ADAP00813 363 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 PRB2P02812 416 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-203ENST00000424270 C8GP07360 202 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 FPR2P25090 351 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 ABCD3P28288 659 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 TLX1P31314 330 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-203ENST00000424270 PCGF2P35227 344 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 CETN2P41208 172 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 RGS4P49798 205 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 ZNF83P51522 516 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 CLCN7P51798 805 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 ARFIP2P53365 341 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 SUCLG1P53597 346 aaKnown RBP5.6□□□□□ -1.51
SDCBP-203ENST00000424270 HNRNPH2P55795 449 aaKnown RBP5.6□□□□□ -1.51
SDCBP-203ENST00000424270 ACVR1Q04771 509 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 KLF1Q13351 362 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-203ENST00000424270 P2RY6Q15077 328 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 SFRP5Q5T4F7 317 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 DUPD1Q68J44 220 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 ZNF544Q6NX49 715 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 ZNF793Q6ZN11 406 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 DEF8Q6ZN54 512 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 DGAT2L6Q6ZPD8 337 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 NUP54Q7Z3B4 507 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 KRT78Q8N1N4 520 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 ANKS4BQ8N8V4 417 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 WDSUB1Q8N9V3 476 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 OR5M1Q8NGP8 315 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 C22orf15Q8WYQ4 148 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 TMEM186Q96B77 213 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 TMCO6Q96DC7 493 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 LRRC37BQ96QE4 947 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 NODALQ96S42 347 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 GPR21Q99679 349 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 MAPKAP1Q9BPZ7 522 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 PELOQ9BRX2 385 aaKnown RBP5.6□□□□□ -1.51
SDCBP-203ENST00000424270 ROGDIQ9GZN7 287 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 SAP130Q9H0E3 1048 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 NUP62CLQ9H1M0 184 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 NARFLQ9H6Q4 476 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 PELI2Q9HAT8 420 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 NTN4Q9HB63 628 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 TRMT6Q9UJA5 497 aaKnown RBP5.6□□□□□ -1.51
SDCBP-203ENST00000424270 KLHL21Q9UJP4 597 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 PCDHB14Q9Y5E9 798 aa5.6□□□□□ -1.51
SDCBP-203ENST00000424270 FREM3P0C091 2139 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 MED12LQ86YW9 2145 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 NINQ8N4C6 2090 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 LOC105371242A0A075B767 164 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 LOC100653049A0A140TA62 436 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 ERI2A8K979 691 aaKnown RBP5.59□□□□□ -1.51
SDCBP-203ENST00000424270 SS18L1O75177 396 aaPredicted RBP5.59□□□□□ -1.51
SDCBP-203ENST00000424270 LYZL6O75951 148 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 KRT34O76011 436 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 CLDN9O95484 217 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 IL33O95760 270 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 KNG1P01042 644 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 ABCB1P08183 1280 aaPredicted RBP5.59□□□□□ -1.51
SDCBP-203ENST00000424270 TMEM253P0C7T8 217 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 IFNGR1P15260 489 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 GCH1P30793 250 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 SSTR4P31391 388 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 KRT20P35900 424 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms