RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 EFNA1P20827 205 aaPredicted RBP17■□□□□ 0.31
HDAC6-205ENST00000423941 MDH1P40925 334 aaKnown RBP17■□□□□ 0.31
HDAC6-205ENST00000423941 KIR3DL1P43629 444 aa17■□□□□ 0.31
HDAC6-205ENST00000423941 HBA1P69905 142 aa17■□□□□ 0.31
HDAC6-205ENST00000423941 GUCY1A3Q02108 690 aa17■□□□□ 0.31
HDAC6-205ENST00000423941 MAPKAPK3Q16644 382 aa17■□□□□ 0.31
HDAC6-205ENST00000423941 NXNQ6DKJ4 435 aa17■□□□□ 0.31
HDAC6-205ENST00000423941 OR4F3Q6IEY1 312 aa17■□□□□ 0.31
HDAC6-205ENST00000423941 TMEM81Q6P7N7 255 aa17■□□□□ 0.31
HDAC6-205ENST00000423941 NPSR1Q6W5P4 371 aa17■□□□□ 0.31
HDAC6-205ENST00000423941 TMEM64Q6YI46 380 aa17■□□□□ 0.31
HDAC6-205ENST00000423941 ACAD11Q709F0 780 aa17■□□□□ 0.31
HDAC6-205ENST00000423941 SULF2Q8IWU5 870 aa17■□□□□ 0.31
HDAC6-205ENST00000423941 ZFP62Q8NB50 900 aaPredicted RBP17■□□□□ 0.31
HDAC6-205ENST00000423941 GLB1L3Q8NCI6 653 aaPredicted RBP17■□□□□ 0.31
HDAC6-205ENST00000423941 GRHL3Q8TE85 626 aa17■□□□□ 0.31
HDAC6-205ENST00000423941 FAR1Q8WVX9 515 aa17■□□□□ 0.31
HDAC6-205ENST00000423941 FRMD6Q96NE9 622 aa17■□□□□ 0.31
HDAC6-205ENST00000423941 SECISBP2Q96T21 854 aaKnown RBP17■□□□□ 0.31
HDAC6-205ENST00000423941 SIKE1Q9BRV8 207 aa17■□□□□ 0.31
HDAC6-205ENST00000423941 C3orf14Q9HBI5 128 aa17■□□□□ 0.31
HDAC6-205ENST00000423941 ZIM2Q9NZV7 527 aa17■□□□□ 0.31
HDAC6-205ENST00000423941 PRSS51A0A1B0GVH4 220 aa16.99■□□□□ 0.31
HDAC6-205ENST00000423941 CAPN14A8MX76 684 aa16.99■□□□□ 0.31
HDAC6-205ENST00000423941 C6orf47O95873 294 aa16.99■□□□□ 0.31
HDAC6-205ENST00000423941 ABCB1P08183 1280 aaPredicted RBP16.99■□□□□ 0.31
HDAC6-205ENST00000423941 CNR1P21554 472 aa16.99■□□□□ 0.31
HDAC6-205ENST00000423941 GPC1P35052 558 aa16.99■□□□□ 0.31
HDAC6-205ENST00000423941 NRG3P56975 720 aa16.99■□□□□ 0.31
HDAC6-205ENST00000423941 CORO7P57737 925 aa16.99■□□□□ 0.31
HDAC6-205ENST00000423941 IRX1P78414 480 aaPredicted RBP16.99■□□□□ 0.31
HDAC6-205ENST00000423941 PGS1Q32NB8 556 aa16.99■□□□□ 0.31
HDAC6-205ENST00000423941 SPANXN4Q5MJ08 99 aa16.99■□□□□ 0.31
HDAC6-205ENST00000423941 SLC22A10Q63ZE4 541 aa16.99■□□□□ 0.31
HDAC6-205ENST00000423941 ZCCHC12Q6PEW1 402 aa16.99■□□□□ 0.31
HDAC6-205ENST00000423941 NUP43Q8NFH3 380 aa16.99■□□□□ 0.31
HDAC6-205ENST00000423941 GOT1L1Q8NHS2 421 aaPredicted RBP16.99■□□□□ 0.31
HDAC6-205ENST00000423941 FAM120BQ96EK7 910 aaKnown RBP16.99■□□□□ 0.31
HDAC6-205ENST00000423941 SLX1AQ9BQ83 275 aa16.99■□□□□ 0.31
HDAC6-205ENST00000423941 CXorf36Q9H7Y0 433 aa16.99■□□□□ 0.31
HDAC6-205ENST00000423941 NEUROD4Q9HD90 331 aa16.99■□□□□ 0.31
HDAC6-205ENST00000423941 CNIH4Q9P003 139 aa16.99■□□□□ 0.31
HDAC6-205ENST00000423941 CNOT11Q9UKZ1 510 aaKnown RBP16.99■□□□□ 0.31
HDAC6-205ENST00000423941 KLRC4-KLRK1H3BQV0 150 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 POLR3GO15318 223 aaPredicted RBP16.98■□□□□ 0.31
HDAC6-205ENST00000423941 PEX1O43933 1283 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 TSPAN2O60636 221 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 PPM1BO75688 479 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 CCL3P10147 92 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 TMED10P49755 219 aaKnown RBP16.98■□□□□ 0.31
HDAC6-205ENST00000423941 FOXO1Q12778 655 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 FAM174BQ3ZCQ3 159 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 CYP27C1Q4G0S4 372 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 ANXA8L1Q5VT79 327 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 NUP54Q7Z3B4 507 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.98■□□□□ 0.31
HDAC6-205ENST00000423941 CLECL1Q8IZS7 167 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 SLC34A3Q8N130 599 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 BCORP1Q8N888 145 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 RFWD2Q8NHY2 731 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 SFXN5Q8TD22 340 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 RNF138Q8WVD3 245 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 HGDQ93099 445 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 OMA1Q96E52 524 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 SLC35A4Q96G79 324 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 ZNF317Q96PQ6 595 aaPredicted RBP16.98■□□□□ 0.31
HDAC6-205ENST00000423941 TMEM45AQ9NWC5 275 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 FAM120CQ9NX05 1096 aaKnown RBP16.98■□□□□ 0.31
HDAC6-205ENST00000423941 GIN1Q9NXP7 522 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 NINQ8N4C6 2090 aa16.98■□□□□ 0.31
HDAC6-205ENST00000423941 OR6C70A6NIJ9 312 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 SLC22A3O75751 556 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 NKX2-2O95096 273 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 CRYABP02511 175 aaKnown RBP16.97■□□□□ 0.31
HDAC6-205ENST00000423941 PGRP06401 933 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 S100A3P33764 101 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 CCT3P49368 545 aaKnown RBP16.97■□□□□ 0.31
HDAC6-205ENST00000423941 TDGF1P3P51864 188 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 FBXW4P57775 412 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 PRR5P85299 388 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 GAB1Q13480 694 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 RPS6KA2Q15349 733 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 NNATQ16517 81 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 RNFT1Q5M7Z0 435 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 CGB2Q6NT52 195 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 MFSD12Q6NUT3 480 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 FAM180AQ6UWF9 173 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 SLC44A2Q8IWA5 706 aaPredicted RBP16.97■□□□□ 0.31
HDAC6-205ENST00000423941 FBXW8Q8N3Y1 598 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 CDRT4Q8N9R6 151 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 POGLUT1Q8NBL1 392 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 GALNT11Q8NCW6 608 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 OR2M7Q8NG81 312 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 OR10G3Q8NGC4 313 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 SPPL2AQ8TCT8 520 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 NR4A3Q92570 626 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 MOAP1Q96BY2 351 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 MAGED4Q96JG8 741 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 MARK4Q96L34 752 aa16.97■□□□□ 0.31
HDAC6-205ENST00000423941 CCDC115Q96NT0 180 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms