RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 FAM180BQ6P0A1 224 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 LETMD1Q6P1Q0 360 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 ADGRE4PQ86SQ3 457 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 RELL1Q8IUW5 271 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 WDSUB1Q8N9V3 476 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 OR52R1Q8NGF1 315 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 ZNF483Q8TF39 744 aaPredicted RBP13.48□□□□□ -0.25
RPS28-201ENST00000417088 SELENOMQ8WWX9 145 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 KLHL29Q96CT2 875 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 CNRIP1Q96F85 164 aaPredicted RBP13.48□□□□□ -0.25
RPS28-201ENST00000417088 ZNF681Q96N22 645 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 OR2B2Q9GZK3 357 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 GSX1Q9H4S2 264 aaPredicted RBP13.48□□□□□ -0.25
RPS28-201ENST00000417088 PLEKHF2Q9H8W4 249 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 BRF2Q9HAW0 419 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 KLRF1Q9NZS2 232 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 ZNF225Q9UK10 706 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 PSME2Q9UL46 239 aa13.48□□□□□ -0.25
RPS28-201ENST00000417088 RPH3AQ9Y2J0 694 aaPredicted RBP13.48□□□□□ -0.25
RPS28-201ENST00000417088 VPS13CQ709C8 3753 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 PRAMEF25A6NGN4 478 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 CLCA1A8K7I4 914 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 TO15178 435 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 OTCP00480 354 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 SBK3P0C264 359 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 FOSL1P15407 271 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 GCKP35557 465 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 MRPS35P82673 323 aaKnown RBP13.47□□□□□ -0.25
RPS28-201ENST00000417088 SRYQ05066 204 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 DEFB113Q30KQ7 82 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 C8orf74Q6P047 294 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 ENPP6Q6UWR7 440 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 PLXDC2Q6UX71 529 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 TRIM42Q8IWZ5 723 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 TMEM151AQ8N4L1 468 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 C1orf52Q8N6N3 182 aaKnown RBP13.47□□□□□ -0.25
RPS28-201ENST00000417088 OR14L1PQ8NHC6 308 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 RDH11Q8TC12 318 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 ANP32BQ92688 251 aaKnown RBP13.47□□□□□ -0.25
RPS28-201ENST00000417088 HBEGFQ99075 208 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 MRPL57Q9BQC6 102 aaKnown RBP13.47□□□□□ -0.25
RPS28-201ENST00000417088 G6PC3Q9BUM1 346 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 SFXN3Q9BWM7 321 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 FAIM2Q9BWQ8 316 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 RBM24Q9BX46 236 aaKnown RBP13.47□□□□□ -0.25
RPS28-201ENST00000417088 PRODH2Q9UF12 536 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 SNX6Q9UNH7 406 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 GPR55Q9Y2T6 319 aaPredicted RBP13.47□□□□□ -0.25
RPS28-201ENST00000417088 ZNF780BQ9Y6R6 833 aa13.47□□□□□ -0.25
RPS28-201ENST00000417088 FRG2CA6NGY1 282 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 A8MT66 165 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 H0Y3Z8 333 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 ERN1O75460 977 aaKnown RBP13.46□□□□□ -0.25
RPS28-201ENST00000417088 OR4F21O95013 312 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 RCBTB2O95199 551 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 GOSR1O95249 250 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 HRGP04196 525 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 ALDH9A1P49189 494 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 STARP49675 285 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 SERPINB9P50453 376 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 GFRA1P56159 465 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 TRA2BP62995 288 aaKnown RBP13.46□□□□□ -0.25
RPS28-201ENST00000417088 HMGCS1Q01581 520 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 KEAP1Q14145 624 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 LUZP2Q86TE4 346 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 PLCZ1Q86YW0 608 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 ZNF675Q8TD23 568 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 WNT2BQ93097 391 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 TMBIM1Q969X1 311 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 INTS12Q96CB8 462 aaKnown RBP13.46□□□□□ -0.25
RPS28-201ENST00000417088 ZFP3Q96NJ6 502 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 COL21A1Q96P44 957 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 UCN2Q96RP3 112 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 PAFAH2Q99487 392 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 TM9SF2Q99805 663 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 YIPF4Q9BSR8 244 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 C1QTNF3Q9BXJ4 246 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 MRPL46Q9H2W6 279 aaKnown RBP13.46□□□□□ -0.25
RPS28-201ENST00000417088 CDC42EP4Q9H3Q1 356 aaKnown RBP13.46□□□□□ -0.25
RPS28-201ENST00000417088 ANKRA2Q9H9E1 313 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 NMRK1Q9NWW6 199 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 GALNT8Q9NY28 637 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 TAS2R10Q9NYW0 307 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 HEY2Q9UBP5 337 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 TRPS1Q9UHF7 1281 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 UTS2RQ9UKP6 389 aa13.46□□□□□ -0.25
RPS28-201ENST00000417088 A0A1W2PPR1 153 aa13.45□□□□□ -0.26
RPS28-201ENST00000417088 OR6C70A6NIJ9 312 aa13.45□□□□□ -0.26
RPS28-201ENST00000417088 NME6O75414 186 aaPredicted RBP13.45□□□□□ -0.26
RPS28-201ENST00000417088 REM1O75628 298 aa13.45□□□□□ -0.26
RPS28-201ENST00000417088 CHN1P15882 459 aa13.45□□□□□ -0.26
RPS28-201ENST00000417088 SRD5A2P31213 254 aa13.45□□□□□ -0.26
RPS28-201ENST00000417088 HSD17B3P37058 310 aa13.45□□□□□ -0.26
RPS28-201ENST00000417088 ZNF628Q5EBL2 1059 aa13.45□□□□□ -0.26
RPS28-201ENST00000417088 TCHHL1Q5QJ38 904 aaPredicted RBP13.45□□□□□ -0.26
RPS28-201ENST00000417088 IFNEQ86WN2 208 aa13.45□□□□□ -0.26
RPS28-201ENST00000417088 CCDC116Q8IYX3 515 aa13.45□□□□□ -0.26
RPS28-201ENST00000417088 WFDC11Q8NEX6 87 aa13.45□□□□□ -0.26
RPS28-201ENST00000417088 DCAKDQ8WVC6 231 aa13.45□□□□□ -0.26
RPS28-201ENST00000417088 TMCO6Q96DC7 493 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms