RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 PLOD3O60568 738 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 CD22P20273 847 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 MANFP55145 182 aaKnown RBP5.4□□□□□ -1.54
LMBR1-204ENST00000415428 HSPA14Q0VDF9 509 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 CCNG2Q16589 344 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 PTRHD1Q6GMV3 140 aaKnown RBP5.4□□□□□ -1.54
LMBR1-204ENST00000415428 UBE2R2Q712K3 238 aaPredicted RBP5.4□□□□□ -1.54
LMBR1-204ENST00000415428 SLC43A2Q8N370 569 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 LRRN4CLQ8ND94 238 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 WDR20Q8TBZ3 569 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 FAM168AQ92567 244 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 ZNF75CPQ92670 426 aaPredicted RBP5.4□□□□□ -1.54
LMBR1-204ENST00000415428 CSF3RQ99062 836 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 DERL2Q9GZP9 239 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 LDAHQ9H6V9 325 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 C6orf203Q9P0P8 240 aaPredicted RBP5.4□□□□□ -1.54
LMBR1-204ENST00000415428 ERVK-11Q9UQG0 969 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 MYO7BQ6PIF6 2116 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 E7EQL1 145 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 H3BSA7 217 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 RPL36A-HNRNPH2H7BZ11 118 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 NDUFS4O43181 175 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 ICOSLGO75144 302 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 COILP38432 576 aaPredicted RBP5.4□□□□□ -1.54
LMBR1-204ENST00000415428 CLK1P49759 484 aaKnown RBP5.4□□□□□ -1.54
LMBR1-204ENST00000415428 LGALS3BPQ08380 585 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 ZKSCAN8Q15776 578 aaPredicted RBP5.4□□□□□ -1.54
LMBR1-204ENST00000415428 FXNQ16595 210 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 SH2D4BQ5SQS7 431 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 LIPJQ5W064 366 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 GTF2IRD2BQ6EKJ0 949 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 RNF111Q6ZNA4 994 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 ESPNLQ6ZVH7 1005 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 KIAA1328Q86T90 577 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 GTF2IRD2Q86UP8 949 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 KRT78Q8N1N4 520 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 ZNF610Q8N9Z0 462 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 FAM76AQ8TAV0 307 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 WIPF2Q8TF74 440 aaPredicted RBP5.4□□□□□ -1.54
LMBR1-204ENST00000415428 COL21A1Q96P44 957 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 NAT9Q9BTE0 207 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 FUT8Q9BYC5 575 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 PLAC1Q9HBJ0 212 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 LMBRD1Q9NUN5 540 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 TRMT1Q9NXH9 659 aaKnown RBP5.4□□□□□ -1.54
LMBR1-204ENST00000415428 UBP1Q9NZI7 540 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 EHD3Q9NZN3 535 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 MALT1Q9UDY8 824 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 CRYL1Q9Y2S2 319 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 FKBP7Q9Y680 259 aa5.4□□□□□ -1.54
LMBR1-204ENST00000415428 COX7A2P14406 83 aa5.4□□□□□ -1.55
LMBR1-204ENST00000415428 GDF1P27539 372 aa5.4□□□□□ -1.55
LMBR1-204ENST00000415428 PIGAP37287 484 aa5.4□□□□□ -1.55
LMBR1-204ENST00000415428 RAC1P63000 192 aa5.4□□□□□ -1.55
LMBR1-204ENST00000415428 LCP2Q13094 533 aa5.4□□□□□ -1.55
LMBR1-204ENST00000415428 PHKG1Q16816 387 aa5.4□□□□□ -1.55
LMBR1-204ENST00000415428 EIPR1Q53HC9 387 aa5.4□□□□□ -1.55
LMBR1-204ENST00000415428 TRIM40Q6P9F5 258 aa5.4□□□□□ -1.55
LMBR1-204ENST00000415428 DGAT2L6Q6ZPD8 337 aa5.4□□□□□ -1.55
LMBR1-204ENST00000415428 IFNEQ86WN2 208 aa5.4□□□□□ -1.55
LMBR1-204ENST00000415428 CAPZA3Q96KX2 299 aa5.4□□□□□ -1.55
LMBR1-204ENST00000415428 PIGQQ9BRB3 760 aa5.4□□□□□ -1.55
LMBR1-204ENST00000415428 TMEM79Q9BSE2 394 aa5.4□□□□□ -1.55
LMBR1-204ENST00000415428 EMC9Q9Y3B6 208 aa5.4□□□□□ -1.55
LMBR1-204ENST00000415428 SVEP1Q4LDE5 3571 aa5.4□□□□□ -1.55
LMBR1-204ENST00000415428 FAT2Q9NYQ8 4349 aa5.4□□□□□ -1.55
LMBR1-204ENST00000415428 PRAMEF4O60810 478 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 F10P00742 488 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 TUBBP07437 444 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 PABPC4LP0CB38 370 aaKnown RBP5.39□□□□□ -1.55
LMBR1-204ENST00000415428 APOBEC3AP31941 199 aaPredicted RBP5.39□□□□□ -1.55
LMBR1-204ENST00000415428 DEPDC1Q5TB30 811 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 PRAMEF9Q5VWM5 478 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 Q71RC1 249 aaPredicted RBP5.39□□□□□ -1.55
LMBR1-204ENST00000415428 THOC6Q86W42 341 aaKnown RBP5.39□□□□□ -1.55
LMBR1-204ENST00000415428 PAF1Q8N7H5 531 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 CMTM7Q96FZ5 175 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 NODALQ96S42 347 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 ACTR6Q9GZN1 396 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 SERHL2Q9H4I8 314 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 ETNK1Q9HBU6 452 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 CTTNBP2NLQ9P2B4 639 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 HEY2Q9UBP5 337 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 PRODH2Q9UF12 536 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 R3HDM2Q9Y2K5 976 aaKnown RBP5.39□□□□□ -1.55
LMBR1-204ENST00000415428 SPG11Q96JI7 2443 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 OR51F1A6NGY5 319 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 ZNF814B7Z6K7 855 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 FGF17O60258 216 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 IL33O95760 270 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 TTC4O95801 387 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 EMDP50402 254 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 AGFG1P52594 562 aaKnown RBP5.39□□□□□ -1.55
LMBR1-204ENST00000415428 SETDB1Q15047 1291 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 MLC1Q15049 377 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 TTC19Q6DKK2 380 aaPredicted RBP5.39□□□□□ -1.55
LMBR1-204ENST00000415428 GPSM1Q86YR5 675 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 TMCO6Q96DC7 493 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 NAP1L5Q96NT1 182 aaPredicted RBP5.39□□□□□ -1.55
LMBR1-204ENST00000415428 PACSIN1Q9BY11 444 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms