RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 ARMCX4Q5H9R4 360 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 ATAD3BQ5T9A4 648 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 LAIR1Q6GTX8 287 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 LGI4Q8N135 537 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 CARFQ8N187 725 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 SETD6Q8TBK2 473 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 GGHQ92820 318 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 TMCO6Q96DC7 493 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 FEVQ99581 238 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 CHRNA10Q9GZZ6 450 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 CHST8Q9H2A9 424 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 PRDM9Q9NQV7 894 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 C1GALT1Q9NS00 363 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 EPHA6Q9UF33 1036 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 ANGPT4Q9Y264 503 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 KLHL20Q9Y2M5 609 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 IFT52Q9Y366 437 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 PCDHGA3Q9Y5H0 932 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 A0A075B6Q4 140 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 C1orf226A1L170 272 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 M0R082 166 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 NUDT21O43809 227 aaKnown RBP10.89□□□□□ -0.67
RFFL-205ENST00000415395 CTSVO60911 334 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 CCNB2O95067 398 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 KRT75O95678 551 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 ADORA3P0DMS8 318 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 SMIM10L1P0DMW3 83 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 ALOX12P18054 663 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 FRKP42685 505 aaPredicted RBP10.89□□□□□ -0.67
RFFL-205ENST00000415395 CRATP43155 626 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 LSSP48449 732 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 IDH2P48735 452 aaKnown RBP10.89□□□□□ -0.67
RFFL-205ENST00000415395 PRIM2P49643 509 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 RGS6P49758 472 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 MC1RQ01726 317 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 SUZ12Q15022 739 aaKnown RBP10.89□□□□□ -0.67
RFFL-205ENST00000415395 ZNF528Q3MIS6 628 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 SLX4IPQ5VYV7 408 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 STEAP3Q658P3 488 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 ZNF793Q6ZN11 406 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 GDPGP1Q6ZNW5 385 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 CCDC80Q76M96 950 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 ABHD13Q7L211 337 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 ZNF438Q7Z4V0 828 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 CCDC71Q8IV32 467 aaPredicted RBP10.89□□□□□ -0.67
RFFL-205ENST00000415395 CCDC103Q8IW40 242 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 CLECL1Q8IZS7 167 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 ACOT4Q8N9L9 421 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 DTWD2Q8NBA8 298 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 OR52N2Q8NGI0 321 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 HTRA1Q92743 480 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 SMIM10Q96HG1 83 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 Q96MT0 163 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 NECAB3Q96P71 396 aaPredicted RBP10.89□□□□□ -0.67
RFFL-205ENST00000415395 CD180Q99467 661 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 DPH2Q9BQC3 489 aaPredicted RBP10.89□□□□□ -0.67
RFFL-205ENST00000415395 DUSP23Q9BVJ7 150 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 CDCA4Q9BXL8 241 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 NLNQ9BYT8 704 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 NUAK2Q9H093 628 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 KLHL31Q9H511 634 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 TMEM38AQ9H6F2 299 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 C3orf14Q9HBI5 128 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 EVA1BQ9NVM1 165 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 UCKL1Q9NWZ5 548 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 GRIP1Q9Y3R0 1128 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 SNX11Q9Y5W9 270 aa10.89□□□□□ -0.67
RFFL-205ENST00000415395 PI4KAP42356 2102 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 GOLGA4Q13439 2230 aaKnown RBP10.88□□□□□ -0.67
RFFL-205ENST00000415395 LOC100506127A0A0U1RQW1 187 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 RHPN2P1A8MT19 583 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 CCRL2O00421 344 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 SDC3O75056 442 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 GSTT2P0CG29 244 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 GSTT2BP0CG30 244 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 PIPP12273 146 aaPredicted RBP10.88□□□□□ -0.67
RFFL-205ENST00000415395 TYRP1P17643 537 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 GPR3P46089 330 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 SELENBP1Q13228 472 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 SLAMF1Q13291 335 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 SCARB2Q14108 478 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 IRF3Q14653 427 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 MLC1Q15049 377 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 IQCCQ4KMZ1 466 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 ZNF544Q6NX49 715 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 ANGPTL8Q6UXH0 198 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 ZNF761Q86XN6 746 aaPredicted RBP10.88□□□□□ -0.67
RFFL-205ENST00000415395 PARP16Q8N5Y8 322 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 SLC5A8Q8N695 610 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 C19orf47Q8N9M1 422 aaKnown RBP10.88□□□□□ -0.67
RFFL-205ENST00000415395 OR4C15Q8NGM1 316 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 OR9Q1Q8NGQ5 310 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 CEP76Q8TAP6 659 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 UTP15Q8TED0 518 aaKnown RBP10.88□□□□□ -0.67
RFFL-205ENST00000415395 SERINC2Q96SA4 455 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 PIP5K1AQ99755 562 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 SYNPO2LQ9H987 977 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 NEUROD4Q9HD90 331 aa10.88□□□□□ -0.67
RFFL-205ENST00000415395 ACSS1Q9NUB1 689 aaPredicted RBP10.88□□□□□ -0.67
RFFL-205ENST00000415395 TAS2R9Q9NYW1 312 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms