RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 FAM69BQ5VUD6 431 aa14.52□□□□□ -0.09
SHMT2-202ENST00000414700 TMEM107Q6UX40 140 aa14.52□□□□□ -0.09
SHMT2-202ENST00000414700 SLC15A4Q8N697 577 aa14.52□□□□□ -0.09
SHMT2-202ENST00000414700 ZFP90Q8TF47 636 aa14.52□□□□□ -0.09
SHMT2-202ENST00000414700 TSLPQ969D9 159 aa14.52□□□□□ -0.09
SHMT2-202ENST00000414700 EFHD2Q96C19 240 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-202ENST00000414700 MAGED4Q96JG8 741 aa14.52□□□□□ -0.09
SHMT2-202ENST00000414700 SLC35A5Q9BS91 424 aa14.52□□□□□ -0.09
SHMT2-202ENST00000414700 THUMPD3Q9BV44 507 aaKnown RBP14.52□□□□□ -0.09
SHMT2-202ENST00000414700 TPT1P8Q9HAU6 139 aa14.52□□□□□ -0.09
SHMT2-202ENST00000414700 PRDM9Q9NQV7 894 aa14.52□□□□□ -0.09
SHMT2-202ENST00000414700 GIMAP4Q9NUV9 329 aa14.52□□□□□ -0.09
SHMT2-202ENST00000414700 PIEZO1Q92508 2521 aa14.52□□□□□ -0.09
SHMT2-202ENST00000414700 C9orf172C9J069 976 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 SOCS2O14508 198 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 SLC30A4O14863 429 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 CTNSO60931 367 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 GPC1P35052 558 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 MC3RP41968 323 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 LRRC74AQ0VAA2 488 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 CEACAM20Q6UY09 585 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 GPR155Q7Z3F1 870 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 NANOGNBQ7Z5D8 188 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 IFNEQ86WN2 208 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 NATD1Q8N6N6 113 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 GALNT6Q8NCL4 622 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 DNAJB8Q8NHS0 232 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 PSMA8Q8TAA3 256 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 STT3BQ8TCJ2 826 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 ADAMTS18Q8TE60 1221 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 TAMM41Q96BW9 452 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 OR1F2PQ96R84 312 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 TUBA1CQ9BQE3 449 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 MESP1Q9BRJ9 268 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 POLR1BQ9H9Y6 1135 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 NEUROD4Q9HD90 331 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 ZNF282Q9UDV7 671 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-202ENST00000414700 CD300AQ9UGN4 299 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 CLDN4O14493 209 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 STK17BO94768 372 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 HBQ1P09105 142 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 CT62P0C5K7 136 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 DDX5P17844 614 aaKnown RBP14.51□□□□□ -0.09
SHMT2-202ENST00000414700 MVDP53602 400 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 STX4Q12846 297 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 NFATC3Q12968 1075 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 COX20Q5RI15 118 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 ANGPTL8Q6UXH0 198 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 OR8J3Q8NGG0 315 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 OR10A6Q8NH74 314 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 FAM120BQ96EK7 910 aaKnown RBP14.51□□□□□ -0.09
SHMT2-202ENST00000414700 PTCHD1Q96NR3 888 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 TAAR9Q96RI9 348 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 PSD2Q9BQI7 771 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 ALOXE3Q9BYJ1 711 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 MKKSQ9NPJ1 570 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-202ENST00000414700 FOXJ2Q9P0K8 574 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 MKL2Q9ULH7 1088 aa14.51□□□□□ -0.09
SHMT2-202ENST00000414700 LAMA5O15230 3695 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 IGLV3-12A0A075B6K2 115 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 RNF103-CHMP3A0A140T963 221 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 KCNK5O95279 499 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 ATP1B1P05026 303 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 ZGLP1P0C6A0 271 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 HSD17B7P56937 341 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 RPS26P62854 115 aaKnown RBP14.5□□□□□ -0.09
SHMT2-202ENST00000414700 RHAGQ02094 409 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 INAQ16352 499 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 TRMT12Q53H54 448 aaKnown RBP14.5□□□□□ -0.09
SHMT2-202ENST00000414700 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.5□□□□□ -0.09
SHMT2-202ENST00000414700 INTS11Q5TA45 600 aaKnown RBP14.5□□□□□ -0.09
SHMT2-202ENST00000414700 MLIPQ5VWP3 458 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 FAM111BQ6SJ93 734 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 SZRD1Q7Z422 152 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 AMER2Q8N7J2 671 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 OR7G2Q8NG99 324 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 WDR36Q8NI36 951 aaKnown RBP14.5□□□□□ -0.09
SHMT2-202ENST00000414700 ADI1Q9BV57 179 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 VN1R1Q9GZP7 353 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 PCDHAC1Q9H158 963 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 CHST8Q9H2A9 424 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 ALG2Q9H553 416 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 SOX17Q9H6I2 414 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-202ENST00000414700 KAT8Q9H7Z6 458 aaKnown RBP14.5□□□□□ -0.09
SHMT2-202ENST00000414700 DLL3Q9NYJ7 618 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 IFT80Q9P2H3 777 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-202ENST00000414700 CDV3Q9UKY7 258 aaKnown RBP14.5□□□□□ -0.09
SHMT2-202ENST00000414700 CORINQ9Y5Q5 1042 aa14.5□□□□□ -0.09
SHMT2-202ENST00000414700 RECKO95980 971 aa14.49□□□□□ -0.09
SHMT2-202ENST00000414700 GNAO1P09471 354 aa14.49□□□□□ -0.09
SHMT2-202ENST00000414700 CCNA2P20248 432 aa14.49□□□□□ -0.09
SHMT2-202ENST00000414700 CCT3P49368 545 aaKnown RBP14.49□□□□□ -0.09
SHMT2-202ENST00000414700 GSK3BP49841 420 aa14.49□□□□□ -0.09
SHMT2-202ENST00000414700 IGLV3-21P80748 117 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-202ENST00000414700 LIPEQ05469 1076 aa14.49□□□□□ -0.09
SHMT2-202ENST00000414700 EIF3IQ13347 325 aaKnown RBP14.49□□□□□ -0.09
SHMT2-202ENST00000414700 ITGADQ13349 1161 aa14.49□□□□□ -0.09
SHMT2-202ENST00000414700 OXA1LQ15070 435 aa14.49□□□□□ -0.09
SHMT2-202ENST00000414700 NKG7Q16617 165 aa14.49□□□□□ -0.09
SHMT2-202ENST00000414700 ERMP1Q7Z2K6 904 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms