RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 FUBP1Q96AE4 644 aaKnown RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 C18orf25Q96B23 403 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 EXOSC8Q96B26 276 aaKnown RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 BSCL2Q96G97 398 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 WWC2-AS2Q96NR7 200 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 OR2A14Q96R47 310 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM209Q96SK2 561 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 CD180Q99467 661 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 PRMT1Q99873 361 aaKnown RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 SYT15Q9BQS2 421 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 ABHD6Q9BV23 337 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 KATNB1Q9BVA0 655 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 TRMT61BQ9BVS5 477 aaKnown RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 TSSK1BQ9BXA7 367 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 FSD1LQ9BXM9 530 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 SIRPDQ9H106 197 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 FAM83DQ9H4H8 585 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 TRABDQ9H4I3 376 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 NARFLQ9H6Q4 476 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 GREM2Q9H772 168 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 KIR3DX1Q9H7L2 352 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 SYNPO2LQ9H987 977 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 CALHM2Q9HA72 323 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 PLGRKTQ9HBL7 147 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 HRASLSQ9HDD0 168 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 MYOZ2Q9NPC6 264 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 DDX19AQ9NUU7 478 aaKnown RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 MIOSQ9NXC5 875 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 ALKBH4Q9NXW9 302 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 VAPAQ9P0L0 249 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 MRM2Q9UI43 246 aaKnown RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF639Q9UID6 485 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 SERTAD3Q9UJW9 196 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 OR52A1Q9UKL2 312 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 OSGIN2Q9Y236 505 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 FOXA2Q9Y261 457 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 PIGLQ9Y2B2 252 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 ASB4Q9Y574 426 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 ENTPD2Q9Y5L3 495 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 B3GALT1Q9Y5Z6 326 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 WDR17Q8IZU2 1322 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 PBRM1Q86U86 1689 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ANKRD36BQ8N2N9 1353 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 A0A1W2PNV4 684 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 A0A1W2PR77 199 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 A0A1W2PRG6 482 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 LNP1A1A4G5 178 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 C9orf170A2RU37 121 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 FAM171A2A8MVW0 826 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 HEPACAM2A8MVW5 462 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 EVPLLA8MZ36 301 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ANKRD65E5RJM6 399 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 LAMTOR5O43504 91 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 SNAI2O43623 268 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 PLRG1O43660 514 aaKnown RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 RBMXL2O75526 392 aaKnown RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 OR6A2O95222 327 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 MOCS3O95396 460 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 H6PDO95479 791 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ATP6V1G2O95670 118 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 AMY2AP04746 511 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 CDK1P06493 297 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 KLK3P07288 261 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 MMP10P09238 476 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 FCGR2AP12318 317 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 GSPT1P15170 499 aaKnown RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 CD1EP15812 388 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ACADSP16219 412 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 NDUFB7P17568 137 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 TSPAN8P19075 237 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 AMY2BP19961 511 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 MALP21145 153 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 KLRC2P26717 231 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 APEX1P27695 318 aaKnown RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 HNRNPH3P31942 346 aaKnown RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 CCR7P32248 378 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 CA5AP35218 305 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 RCVRNP35243 200 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 MPLP40238 635 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ID1P41134 155 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 PNPLA4P41247 253 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 BRCC3P46736 316 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 OR3A3P47888 321 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 CYB561P49447 251 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 GLUD2P49448 558 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 COMPP49747 757 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 BLKP51451 505 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 DNA2P51530 1060 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 DGKQP52824 942 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ART1P52961 327 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ADPRHP54922 357 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 FGF8P55075 233 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 MLF1P58340 268 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ZP1P60852 638 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 LSM6P62312 80 aaKnown RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 HERV-K104P63124 156 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 MRPS22P82650 360 aaKnown RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 MRPS11P82912 194 aaKnown RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 TFAMQ00059 246 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms